LOCUS BC068553 1624 bp mRNA linear HUM 25-JUN-2004
DEFINITION Homo sapiens down-regulator of transcription 1, TBP-binding
(negative cofactor 2), mRNA (cDNA clone MGC:87462 IMAGE:4822070),
complete cds.
ACCESSION BC068553
VERSION BC068553.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1624)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1624)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: e Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4503380.
FEATURES Location/Qualifiers
source 1..1624
/db_xref="H-InvDB:HIT000263110"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87462 IMAGE:4822070"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescript"
gene 1..1624
/gene="DR1"
/gene_synonym="NC2"
/gene_synonym="NC2-BETA"
/db_xref="GeneID:1810"
/db_xref="MIM:601482"
CDS 725..1255
/gene="DR1"
/gene_synonym="NC2"
/gene_synonym="NC2-BETA"
/codon_start=1
/product="DR1 protein"
/protein_id="AAH68553.1"
/db_xref="GeneID:1810"
/db_xref="MIM:601482"
/translation="MASSSGNDDDLTIPRAAINKMIKETLPNVRVANDARELVVNCCT
EFIHLISSEANEICNKSEKKTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRR
KASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASA
SNQAGSSQDEEDDDDI"
BASE COUNT 444 a 403 c 395 g 382 t
ORIGIN
1 agcggcttcc tgcaaacctt ccctggcatc tggagggacc accgttgccg cgtcttcggc
61 ttccacgatc tgcgttcggg ctacgcggcc gcggcggcag ccactgcgac tcccactgtg
121 cctggctctg tccatattag ttcccaggcg gccgtcgccg ttccagcagc ggcagcggca
181 gcggcagcgg cggacatgtt gtgaggcggc ggcgcgggtg tctggaggat ggtttggccg
241 aggcggcggc aacggctgct ggcggcggcg gcagcggcag cggggcctcg ggctctatag
301 agccgagccc gctgggtacc cgcccggtac cgcggcgagg ccagtgcccc tggatcttgc
361 ctctgctccg acgccgttgg ggaccagtta ggcgacagcg cccgcccctc tgaggagaca
421 cgaaggtggt tccccagccg ctcaaatttc cggaccaccg cgctttcccc tcctcagcct
481 gggctgtgct ctctctagaa tcctcgggcc cccactttct tcccaaactc atcctaaatc
541 tctcacacac gcgagtgttc ccagccctca agccagctgc tcctccgttc attttctgca
601 ccctcttcgc aaagcacccc ccgggatcac tctccgaggg cgactttttg agaaatctcg
661 gtggagtagt ggaccagagc tggggagttt ttaaaagccg gggcgcgaga aacaggaagg
721 tactatggct tcctcgtctg gcaacgatga tgatctcact atccccagag ctgctatcaa
781 taaaatgatc aaagagactc ttcctaatgt ccgggtggcc aacgatgctc gagagctggt
841 ggtgaactgc tgcactgaat tcattcacct tatatcttct gaagccaatg agatttgtaa
901 caaatcggaa aagaagacca tctcaccaga gcatgtcata caagcactag aaagtttggg
961 atttggctct tacatcagtg aagtaaaaga agtcttgcaa gagtgtaaaa cagtagcatt
1021 aaaaagaaga aaggccagtt ctcgtttgga aaaccttggc attcctgaag aagagttatt
1081 gagacagcaa caagaattat ttgcaaaagc tagacagcaa caagcagaat tggcccaaca
1141 ggaatggctt caaatgcagc aagctgccca acaagcccag cttgctgctg cctcagccag
1201 tgcatctaat caggcgggat cttctcagga tgaagaagat gatgatgata tctgaaattc
1261 accagctgag tttctatttc ttctataaat gtttttccct gcacaacaaa aacagtgaaa
1321 gaaatgctta tctgtaattt tgtatgcatc ttggtggact tgtcattggt attctaggga
1381 tgtctgctat taagtttcat ctattgtgtg ctatacatgt aaaaactgtc tctttgaact
1441 attgaaaatt taaggttcag tataatatca attttgaatt tttaatggtg tttatgaaat
1501 tttagatagc agcgagtcct tcgtttgatc aataaacagt gttacagata acttcaaaaa
1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaagaa aaaaaaaaaa
1621 aaaa
//