LOCUS BC068553 1624 bp mRNA linear HUM 25-JUN-2004 DEFINITION Homo sapiens down-regulator of transcription 1, TBP-binding (negative cofactor 2), mRNA (cDNA clone MGC:87462 IMAGE:4822070), complete cds. ACCESSION BC068553 VERSION BC068553.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1624) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1624) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 167 Row: e Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4503380. FEATURES Location/Qualifiers source 1..1624 /db_xref="H-InvDB:HIT000263110" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:87462 IMAGE:4822070" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescript" gene 1..1624 /gene="DR1" /gene_synonym="NC2" /gene_synonym="NC2-BETA" /db_xref="GeneID:1810" /db_xref="MIM:601482" CDS 725..1255 /gene="DR1" /gene_synonym="NC2" /gene_synonym="NC2-BETA" /codon_start=1 /product="DR1 protein" /protein_id="AAH68553.1" /db_xref="GeneID:1810" /db_xref="MIM:601482" /translation="MASSSGNDDDLTIPRAAINKMIKETLPNVRVANDARELVVNCCT EFIHLISSEANEICNKSEKKTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRR KASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASA SNQAGSSQDEEDDDDI" BASE COUNT 444 a 403 c 395 g 382 t ORIGIN 1 agcggcttcc tgcaaacctt ccctggcatc tggagggacc accgttgccg cgtcttcggc 61 ttccacgatc tgcgttcggg ctacgcggcc gcggcggcag ccactgcgac tcccactgtg 121 cctggctctg tccatattag ttcccaggcg gccgtcgccg ttccagcagc ggcagcggca 181 gcggcagcgg cggacatgtt gtgaggcggc ggcgcgggtg tctggaggat ggtttggccg 241 aggcggcggc aacggctgct ggcggcggcg gcagcggcag cggggcctcg ggctctatag 301 agccgagccc gctgggtacc cgcccggtac cgcggcgagg ccagtgcccc tggatcttgc 361 ctctgctccg acgccgttgg ggaccagtta ggcgacagcg cccgcccctc tgaggagaca 421 cgaaggtggt tccccagccg ctcaaatttc cggaccaccg cgctttcccc tcctcagcct 481 gggctgtgct ctctctagaa tcctcgggcc cccactttct tcccaaactc atcctaaatc 541 tctcacacac gcgagtgttc ccagccctca agccagctgc tcctccgttc attttctgca 601 ccctcttcgc aaagcacccc ccgggatcac tctccgaggg cgactttttg agaaatctcg 661 gtggagtagt ggaccagagc tggggagttt ttaaaagccg gggcgcgaga aacaggaagg 721 tactatggct tcctcgtctg gcaacgatga tgatctcact atccccagag ctgctatcaa 781 taaaatgatc aaagagactc ttcctaatgt ccgggtggcc aacgatgctc gagagctggt 841 ggtgaactgc tgcactgaat tcattcacct tatatcttct gaagccaatg agatttgtaa 901 caaatcggaa aagaagacca tctcaccaga gcatgtcata caagcactag aaagtttggg 961 atttggctct tacatcagtg aagtaaaaga agtcttgcaa gagtgtaaaa cagtagcatt 1021 aaaaagaaga aaggccagtt ctcgtttgga aaaccttggc attcctgaag aagagttatt 1081 gagacagcaa caagaattat ttgcaaaagc tagacagcaa caagcagaat tggcccaaca 1141 ggaatggctt caaatgcagc aagctgccca acaagcccag cttgctgctg cctcagccag 1201 tgcatctaat caggcgggat cttctcagga tgaagaagat gatgatgata tctgaaattc 1261 accagctgag tttctatttc ttctataaat gtttttccct gcacaacaaa aacagtgaaa 1321 gaaatgctta tctgtaattt tgtatgcatc ttggtggact tgtcattggt attctaggga 1381 tgtctgctat taagtttcat ctattgtgtg ctatacatgt aaaaactgtc tctttgaact 1441 attgaaaatt taaggttcag tataatatca attttgaatt tttaatggtg tttatgaaat 1501 tttagatagc agcgagtcct tcgtttgatc aataaacagt gttacagata acttcaaaaa 1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaagaa aaaaaaaaaa 1621 aaaa //