LOCUS BC068532 3585 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens claudin 12, mRNA (cDNA clone MGC:87367 IMAGE:5294796), complete cds. ACCESSION BC068532 VERSION BC068532.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3585) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3585) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 168 Row: c Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 37537523. FEATURES Location/Qualifiers source 1..3585 /db_xref="H-InvDB:HIT000263089" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:87367 IMAGE:5294796" /tissue_type="Brain, hypothalamus" /clone_lib="NIH_MGC_96" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3585 /gene="CLDN12" /db_xref="GeneID:9069" /db_xref="HGNC:HGNC:2034" CDS 226..960 /gene="CLDN12" /codon_start=1 /product="claudin 12" /protein_id="AAH68532.1" /db_xref="GeneID:9069" /db_xref="HGNC:HGNC:2034" /translation="MGCRDVHAATVLSFLCGIASVAGLFAGTLLPNWRKLRLITFNRN EKNLTVYTGLWVKCARYDGSSDCLMYDTTWYSSVDQLDLRVLQFALPLSMLIAMGALL LCLIGMCNTAFRSSVPNIKLAKCLVNSAGCHLVAGLLFFLAGTVSLSPSIWVIFYNIH LNKKFEPVFSFDYAVYVTIASAGGLFMTSLILFIWYCTCKSLPSPFWQPLYSHPPSMH TYSQPYSARSRLSAIEIDIPVVSHTT" BASE COUNT 1064 a 652 c 662 g 1207 t ORIGIN 1 ggtgtacctc gctgggaacg cacttcctgg gacgctgaga gggagacgct ccaagaggct 61 cctcagtgtg ggcgagtaaa atgccctgcg tgtgagaagc aggctcagat tattgctact 121 ctgtattcag atcttcatgt gtctcttcta agctgaataa agctgttttg gaactgtcag 181 gtacctcaaa gctctgactg acagtactcc acaagcttgc ctgccatggg ctgtcgggat 241 gtccacgcag ccacagtcct ttccttcctg tgtggaatcg cctcagtagc aggcctcttt 301 gcagggactc tgcttcccaa ctggagaaaa ttacgattga tcacattcaa cagaaacgag 361 aagaacctga ctgtttacac aggcctgtgg gtgaaatgtg cccggtatga cgggagcagt 421 gactgcctga tgtacgacac tacttggtac tcatcagttg accagctgga cctgcgtgtc 481 ctccagtttg ccctacccct cagcatgctg atcgccatgg gtgccctgct gctctgcctg 541 attggaatgt gcaacactgc cttcaggtcc tcggtgccca acatcaaact ggccaagtgt 601 ctggtcaata gtgcaggttg ccacctggtg gctgggctgc tatttttcct ggcaggtact 661 gtgagcctct ccccatctat ctgggtcatc ttttataaca tccatctgaa caagaagttt 721 gagccagtct tttcatttga ctatgcagtg tatgtcacta ttgctagtgc tgggggcctg 781 tttatgactt cccttatact atttatttgg tattgtacat gcaaatcttt gccttctcct 841 ttctggcaac cattgtactc ccatccaccc agtatgcata cttactcaca gccctattca 901 gcacgctctc gcctctctgc cattgaaatt gacattccag tagtttcaca caccacttaa 961 tggggaaata gttaattgtt aaagaaaact tcttgtagcc tcacattccc cttgtgcaaa 1021 gagctctttt ggacctacat acattttcct ttgtttttga ccaatcaatg aagccaaatt 1081 tatatgtcct agtagaatga agtgctgcta gtttttatga gaagtatatt atattaaatg 1141 tgaatttttt aaattttgct tcttatactg gaaggaattt tagccttcat attgatatct 1201 aattaattat ttaagtggaa taggcctgca tcacaattga ggtaatgtag agcaacatgt 1261 taaagaatga tggttagcag aagctgttgt atacaatctt catgaaaatt tcagtgtgta 1321 tttttctttt tctataatac ctttaactgc aaagaaaagg cagtttcaaa tataagaaat 1381 ttatttcagg taagggtaat attttaatag tagtcaataa tctagcttaa ggctgtaact 1441 cttctatcgg ggctaattgt atgaataggt gtcagtatgt tgaagattac tttcttttgt 1501 gactttcttc tacctcatgc cactgtttaa aagtaaaacg tattttaatg atgttagaat 1561 aagactacca ttctaaatat cacctactta tgaataacat gtaataattt ttaacattaa 1621 tgattccata aattgtatta ttgggattag aatgtgcttt atgacaggtt agtgtttcct 1681 ctgaggcaga aaactctttt ttggagatat cttccatcaa gcagtactcg tgcccatata 1741 caatctctta gtggctagga gaaataaata aaagggccat aatggtttgt tctctttcag 1801 acataattta gtaggggaca agaagtctgt tcttcagtga gtacactaga gatttactct 1861 ggtgactgcc ttttgagtta tgggtgaagt aaggtatggc tttaccataa ccttgattca 1921 ttcacccttg attcatttct cgcccccgtc actgattatt tccttgagca tatatctctg 1981 cctaacactt tagtaggtgc tatagaggat acatgaaaag tatgagatct ggttccatcc 2041 agtaagacat tttaatagag aagatcaaaa tgttacctgg cagttgggga ataatctgac 2101 ttcgttggca gttggcctta acttcttaat cattgatcca ggaatatttc aaccagagac 2161 acaactttct ggcagacaga caaattgtac aacaccaaca atatcctgga ccttgaaatt 2221 ctgtttactt cagtccattg tatcctttaa ggcacctgtg ctagcctaga ttttgtaata 2281 acactgattt atgagaatgg acaaaagtgg tagggaaatt gttccctctc cacttctgaa 2341 agtatgatga tgtattaagg atggaggagt tattaaaaat gtctcttctg atgaggtaac 2401 aattagatga aaccatgtta aagctgagat gaacacttag aaattcaggg atattgggtc 2461 tttagcctta tgaatttgag ctgcttattt aattggtgta atttactaca tattagtact 2521 atattcgtaa ggatttttta ttaaccatta cagattttac aaacagctag ttatatggta 2581 aacagattat tatgcctttt tgcaattctg aatatgattc tagtatttgt gtagatgtat 2641 ttggtacttt ttcacctaat tccaacacta gtttatatat atagcgaata aatctagttg 2701 tataaatttt taaatgccgt cagtagaaag cacacaaggt tatgattttt ttaattactg 2761 gcttatgatt tctttcactt ctgatccttt tcctttttct cagatgtagc tgagtcttga 2821 tcattttaag acaacgatgg gtagaatttt gagattaatg ttaattttcc ctttttgtta 2881 atttcagtcc cctctcacta tgcttttgtc cagaaggatc aagaattcta ccatcccttg 2941 ggtctttgtg tataaacaat gttaaataaa ggtagactca gtctttaaga tattagacag 3001 tttttttagt ccatgggatt gtaaatataa acattaactt tcctataaga atattttggc 3061 tttgtaatct atagcctcaa attggtattt attatggatt cactagacaa acagctgttt 3121 ccttattgtc ttttttcttt agtgtttctg atttgctatc agtagctgtt tttaaagcca 3181 tccaaggaaa ataattattt acagtttttg aagtcacttt tgagccctca tcaagctctc 3241 attgtgatgg gagggatacc tttttgttgt taaaagccta ttattgttaa aggcctttta 3301 tggaaaccaa cttggaaaac aaccttaaat gtggatgtat cagatttggt ttatccagcc 3361 atgggagaga aaacaaacct aagtttactt tacttgtaca tatacactac aatggatagt 3421 atatttgctg taaactacaa tgtaaaacct caataaaagt gcgctgtact tcttaatgtt 3481 tattaaaaga tgtattttta caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 3541 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