LOCUS BC068517 3005 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens retinol saturase (all-trans-retinol 13,14-reductase),
mRNA (cDNA clone MGC:87311 IMAGE:4826703), complete cds.
ACCESSION BC068517
VERSION BC068517.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3005)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3005)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: g Column: 12.
FEATURES Location/Qualifiers
source 1..3005
/db_xref="H-InvDB:HIT000263074"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87311 IMAGE:4826703"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3005
/gene="RETSAT"
/gene_synonym="FLJ20296"
/db_xref="GeneID:54884"
/db_xref="HGNC:HGNC:25991"
CDS 22..1854
/gene="RETSAT"
/gene_synonym="FLJ20296"
/codon_start=1
/product="retinol saturase (all-trans-retinol
13,14-reductase)"
/protein_id="AAH68517.1"
/db_xref="GeneID:54884"
/db_xref="HGNC:HGNC:25991"
/translation="MWLPLVLLLAVLLLAVLCKVYLGLFSGSSPNPFSEDVKRPPAPL
VTDKEARKKVLKQAFSANQVPEKLDVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKA
GGCCHTFGKNGLEFDTGIHYIGRMEEGSIGRFILDQISEGQLDWAPLSSPFDIMVLEG
PNGRKEYPMYSGEKAYIQGLKEKFPQEEAIIDKYIKLVKVVSSGAPHAILLKFLPLPV
VQLLDRCGLLTRFSPFLQASTQSLAEVLQQLGASSELQAVLSYIFPTYGVTPNHSAFS
MHALLVNHYMKGGFYPRGGSSEIAFHTIPVIQRAGGAVLTKATVQSVLLDSAGKACGV
SVKKGHELVNIYCPIVVSNAGLFNTYEHLLPGNARCLPGVKQQLGTVRPGLGMTSVFI
CLRGTKEDLHLPSTNYYVYYDTDMDQAMERYVSMPREEAAEHIPLLFFAFPSAKDPTW
EDRFPGRSTMIMLIPTAYEWFEEWQAELKGKRGSDYETFKNSFVEASMSVVLKLFPQL
EGKVESVTAGSPLTNQFYLAAPRGACYGADHDLGRLHPCVMASLRAQSPIPNLYLTGQ
DIFTCGLVGALQGALLCSSAILKRNLYSDLKNLDSRIRAQKKKN"
BASE COUNT 699 a 762 c 825 g 719 t
ORIGIN
1 acccgacccg acgccggcgt gatgtggctt ccgctggtgc tgctcctggc tgtgctgctg
61 ctggccgtcc tctgcaaagt ttacttggga ctattctctg gcagctcccc gaatcctttc
121 tccgaagatg tcaaacggcc cccagcgccc ctggtaactg acaaggaggc caggaagaag
181 gttctcaaac aagctttttc agccaaccaa gtgccggaga agctggatgt ggtggtaatt
241 ggcagtggct ttgggggcct ggctgcagct gcaattctag ctaaagctgg caagcgagtc
301 ctggtgctgg aacaacatac caaggcaggg ggctgctgtc atacctttgg aaagaatggc
361 cttgaatttg acacaggaat ccattacatt gggcgtatgg aagagggcag cattggccgt
421 tttatcttgg accagatcag tgaagggcag ctggactggg ctcccctgtc ctctcctttt
481 gacatcatgg tactggaagg gcccaatggc cgaaaggagt accccatgta cagtggagag
541 aaagcctaca ttcagggcct caaggagaag tttccacagg aggaagctat cattgacaag
601 tatataaagc tggttaaggt ggtatccagt ggagcccctc atgccatcct gttgaaattc
661 ctcccattgc ccgtggttca gctcctcgac aggtgtgggc tgctgactcg tttctctcca
721 ttccttcaag catccaccca gagcctggct gaggtcctgc agcagctggg ggcctcctct
781 gagctccagg cagtactcag ctacatcttc cccacttacg gtgtcacccc caaccacagt
841 gccttttcca tgcacgccct gctggtcaac cactacatga aaggaggctt ttatccccga
901 gggggttcca gtgaaattgc cttccacacc atccctgtga ttcagcgggc tgggggcgct
961 gtcctcacaa aggccactgt gcagagtgtg ttgctggact cagctgggaa agcctgtggt
1021 gtcagtgtga agaaggggca tgagctggtg aacatctatt gccccatcgt ggtctccaac
1081 gcaggactgt tcaacaccta tgaacaccta ctgccgggga acgcccgctg cctgccaggt
1141 gtgaagcagc aactggggac ggtgcggccc ggcttaggca tgacctctgt tttcatctgc
1201 ctgcgaggca ccaaggaaga cctgcatctg ccgtccacca actactatgt ttactatgac
1261 acggacatgg accaagcgat ggagcgctac gtctccatgc ccagggaaga ggctgcggaa
1321 cacatccctc ttctcttctt cgctttccca tcagccaaag atccgacctg ggaggaccga
1381 ttcccaggcc ggtccaccat gatcatgctc atacccactg cctacgagtg gtttgaggag
1441 tggcaggcgg agctgaaggg aaagcggggc agtgactatg agaccttcaa aaactccttt
1501 gtggaagcct ctatgtcagt ggtcctgaaa ctgttcccac agctggaggg gaaggtggag
1561 agtgtgactg caggatcccc actcaccaac cagttctatc tggctgctcc ccgaggtgcc
1621 tgctacgggg ctgaccatga cctgggccgc ctgcaccctt gtgtgatggc ctccttgagg
1681 gcccagagcc ccatccccaa cctctatctg acaggccagg atatcttcac ctgtggactg
1741 gtcggggccc tgcaaggtgc cctgctgtgc agcagcgcca tcctgaagcg gaacttgtac
1801 tcagacctta agaatcttga ttctaggatc cgggcacaga agaaaaagaa ttagttccat
1861 cagggaggag tcagaggaat ttgcccaatg gctggggcat ctcccttgac ttacccataa
1921 tgtctttctg cattagttcc ttgcacgtat aaagcactct aatttggttc tgatgcctga
1981 agagaggcct agtttaaatc acaattccga atctggggca atggaatcac tgcttccagc
2041 tggggcaggt gagatcttta cgccttttat aacatgccat ccctactaat aggatattga
2101 cttggatagc ttgatgtctc atgacgagcg gcgctctgca tccctcaccc atgcctccta
2161 actcagtgat caaagcgaat attccatctg tggatagaac ccctggcagt gttgtcagct
2221 caacctggtg ggttcagttc tgtcctgagg cttctgctct cattcattta gtgctacgct
2281 gcacagttct acactgtcaa gggaaaaggg agactaatga ggcttaactc aaaacctggg
2341 cgtggttttg gttgccattc cataggtttg gagagctcta gatctctttt gtgctgggtt
2401 cagtggctct tcaggggaca ggaaatgcct gtgtctggcc agtgtggttc tggagctttg
2461 gggtaacagc aggatccatc agttagtagg gtgcatgtca gatgatcata tccaattcat
2521 atggaagtcc cgggtctgtc ttccttatca tcggggtggc agctggttct caatgtgcca
2581 gcagggactc agtacctgag cctcaatcaa gccttatcca ccaaatacac agggaagggt
2641 gatgcaggga agggtgacat caggagtcag ggcatggact ggtaagatga atactttgct
2701 gggctgaagc aggctgcagg gcattccagc caagggcaca gcaggggaca gtgcagggag
2761 gtgtggggta agggagggaa gtcacatcag aaaagggaaa gccacggaat gtgtgtgaag
2821 cccagaaatg gcatttgcag ttaattagca catgtgaggg ttagacaggt aggtgaatgc
2881 aagctcaagg tttggaaaaa tgacttttca gttatgtctt tggtatcaga catacgaaag
2941 gtctctttgt agttcgtgtt aatgtaacat taataaattt attgattcca aaaaaaaaaa
3001 aaaaa
//