LOCUS BC068502 3959 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens pseudouridylate synthase 7 homolog (S.
cerevisiae)-like, mRNA (cDNA clone MGC:87243 IMAGE:5259952),
complete cds.
ACCESSION BC068502
VERSION BC068502.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3959)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3959)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: i Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46358347.
FEATURES Location/Qualifiers
source 1..3959
/db_xref="H-InvDB:HIT000263059"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87243 IMAGE:5259952"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3959
/gene="PUS7L"
/gene_synonym="DKFZP434G1415"
/db_xref="GeneID:83448"
/db_xref="HGNC:HGNC:25276"
CDS 74..2179
/gene="PUS7L"
/gene_synonym="DKFZP434G1415"
/codon_start=1
/product="pseudouridylate synthase 7 homolog (S.
cerevisiae)-like"
/protein_id="AAH68502.1"
/db_xref="GeneID:83448"
/db_xref="HGNC:HGNC:25276"
/translation="MEEDTDYRIRFSSLCFFNDHVGFHGTIKSSPSDFIVIEIDEQGQ
LVNKTIDEPIFKISEIQLEPNNFPKKPKLDLQNLSLEDGRNQEVHTLIKYTDGDQNHQ
SGSEKEDTIVDGTSKCEEKADVLSSFLDEKTHELLNNFACDVREKWLSKTELIGLPPE
FSIGRIVDKNQRASLHSAIRQKFPFLVTVGKNSEIVVKPNLEYKELCHLVSEEEAFDF
FKYLDAKKENSKFTFKPDTNKDHRKAVHHFVNKKFGNLVETKSFSKMNCSAGNPNVVV
TVRFREKAHKRGKRPLSECQEGKVIYTAFTLRKENLEMFEAIGFLAIKLGVIPSDFSY
AGLKDKKAITYQAMVVRKVTPERLKNIEKEIEKKRMNVFNIRSVDDSLRLGQLKGNHF
DIVIRNLKKQINDSANLRERIMEAIENVKKKGFVNYYGPQRFGKGRKVHTDQIGLALL
KNEMMKAIKLFLTPEDLDDPVNRAKKYFLQTEDAKGTLSLMPEFKVRERALLEALHRF
GMTEEGCIQAWFSLPHSMRIFYVHAYTSKIWNEAVSYRLETYGARVVQGDLVCLDEDI
DDENFQNSKIHLVTEEEGSANMYAIHQVVLPVLGYNIQYPKNKVGQWYHDILSRDGLQ
TCRFKVPTLKLNIPGCYRQILKHPCNLSYQLMEDHDIDVKTKGSHIDETALSLLISFD
LDASCYATVCLKEIMKHDV"
BASE COUNT 1369 a 612 c 760 g 1218 t
ORIGIN
1 aaggcttccg ggcatgcgca cagcgttgtg caaatgaatg ccttccactg aaccgaggca
61 ctgttataga agaatggaag aagatacaga ttatagaatc aggtttagtt ctttgtgttt
121 ctttaatgat cacgttggat ttcatggcac tataaaaagc tcaccaagtg actttattgt
181 tattgaaatt gatgaacagg gacagttagt taataagacc atcgatgagc ctattttcaa
241 gattagtgaa atacaacttg agccaaataa ttttcccaaa aaaccaaaac tagatcttca
301 aaatctgtcc ttagaagatg gaagaaacca agaagttcat actttgatta agtacactga
361 tggtgaccaa aatcatcagt ctggttcaga aaaggaagat actatcgttg atggaacttc
421 caaatgtgaa gaaaaagctg atgttttaag ctcctttttg gatgaaaaaa ctcatgagtt
481 actgaataat tttgcctgtg atgtaagaga gaagtggctt tctaaaacag agctaattgg
541 actacctcct gaattctcaa taggcagaat cgttgacaaa aaccagaggg ctagtttaca
601 cagtgccatt aggcagaaat ttccattttt agtaactgta ggaaaaaaca gtgaaattgt
661 tgtaaaacca aatcttgaat ataaagaact ttgtcatttg gtatctgaag aggaagcatt
721 tgactttttt aaatatttgg atgcaaagaa agaaaattcc aaatttacct ttaaacctga
781 tacaaacaaa gaccacagaa aagctgtcca ccattttgtc aacaaaaagt ttggaaacct
841 tgtggaaacc aaatcttttt ctaaaatgaa ttgcagtgct ggtaatccga atgtggtggt
901 aacagtaaga tttcgggaaa aagcacacaa acgtgggaaa aggcctcttt ctgaatgcca
961 agaaggaaaa gttatatata cagcttttac cctacgaaag gaaaacctgg aaatgtttga
1021 agcgattggt tttttagcta tcaaacttgg tgttattcct tcggatttta gttatgcagg
1081 ccttaaagac aagaaagcca tcacctatca agcaatggtt gttagaaaag tgactccaga
1141 gaggttgaaa aatattgaaa aagaaattga aaagaaaaga atgaatgtct ttaatattcg
1201 gtctgtagat gattccctga gacttggtca gctcaaagga aatcactttg atattgtcat
1261 tagaaattta aaaaaacaaa taaatgattc tgcaaacctg agggagagaa ttatggaagc
1321 aatagaaaat gttaagaaaa aaggctttgt gaattactat ggaccacaga gatttgggaa
1381 gggaaggaaa gttcacacag accaaattgg actagctttg ctgaagaatg aaatgatgaa
1441 agccataaaa ttgtttctta caccagaaga cttggatgat cctgtaaata gagcaaagaa
1501 gtattttctt caaactgagg atgctaaagg cacactttca ttgatgcctg aattcaaagt
1561 gcgtgagaga gcattgttgg aggcattgca ccgctttggc atgaccgagg aaggttgtat
1621 ccaggcatgg ttctctttac cccattccat gcgcatattc tatgttcacg catataccag
1681 caaaatttgg aatgaggcag tatcttacag acttgaaacc tatggagcaa gagtagtgca
1741 gggtgatttg gtctgtttgg atgaagacat tgatgacgag aatttccaaa atagtaaaat
1801 tcacctggta actgaagagg agggatcagc taatatgtat gcaatacatc aggtggttct
1861 tccagtactt ggatacaata ttcagtaccc gaagaacaaa gtagggcagt ggtaccatga
1921 catacttagc agagatggac tacagacatg taggtttaaa gtacctactc tgaaactgaa
1981 tataccaggt tgctatagac agattttgaa acatccctgt aatctctcat accaactaat
2041 ggaagatcat gacattgatg tcaaaacgaa aggttcccac attgatgaaa cagctttgtc
2101 tcttttgatc tcttttgatc ttgatgcttc atgctatgct accgtttgtc tgaaggaaat
2161 aatgaagcat gacgtttaaa actgataccc ttggtataac catatatatg tcactctttg
2221 aaggaaaggg ggctaaaatg tcttaagcac cttccatgtg ttaggaactt cataattgtt
2281 atctctttta attttcacag catcctgaga agttaggatt tgatactgta attttataga
2341 ggatatgtaa gtgtcagggt ccaaatttaa ggtccatgtg accccaaagc ctgtgttttt
2401 tttctattat atgtttcagt gacctttatt ctgtgtcata aagttacaat cttttaaaac
2461 cattaggaat atatataata ctgcaagata acatttaaga aaaaaagttg tgaatattca
2521 tatcctccag ctccttgctt agaacactag taaaattagg tcgcagtgaa gcaaatgttg
2581 gagagaaaga tagatgaagc attttgctaa ttattattgt ccccctttcc tgtttttgaa
2641 attattgatc agaacaatat acaagggaaa tgccatacct ctgtttgtga tagatacccc
2701 agagtagtta ttacctcttt gtgagataag taatctttga tgaagattga aatacaattt
2761 ctcatccaat ttttatatct tggcatacgc tgaccctctt gaccatttgt aattttttca
2821 tattatctaa aacaggtgtt agagtcagac agattcattc ttagattcta gctctgacac
2881 ttactagtga ttttgagtat gttgttgatt tttttgtgtg tggttactga tagaatcaag
2941 acaattacaa cttcataaat gacaaataat aggattatct ccacattttc tgttgctgga
3001 ggaacaaaac attgtgccca tttgaaaatt ttaatttttg ttggtttaac tatcccacat
3061 tataaatcat ccttcaccat tttatatcag ttaaatatgg gtgtgttggg gaggaatgac
3121 tggcatgtag acatgtattg atttaggaag atctgagcat ttctttcatt gttggtaaga
3181 tataatgatg aaatttaaaa agcagtatgg agcattatat atcagtaatg tgatatatat
3241 acttaagcca gtttaaccat tttgggaaat gttagcatta ggaaataaaa tccaaaagaa
3301 ggaagagaag ctatatgcaa tgcaaaattt gcttattgca atattttcat atacagacac
3361 taaaaacagt tttcaaagtc cagcattacg taactaaagt aagtaaaatg atgtgtatca
3421 acttgatggt aaaatatgta gttatttaaa aaagcaatga acaatttagt ttcatgagaa
3481 aatgttgccc cctaaaagta gaacacatat gttacaactg caataatact ctgaattcat
3541 ctttcacaaa taagagacat gttagcatag tgattaaaag cacagatatt ggagacaaac
3601 taacccagtt tgaaccctgg cactgccacg tatagcactg cagccttggg aaagttattt
3661 aaactcatgg gcttcagttt caacatctgt aaaatgggca tgttaacatt gcctacctca
3721 taggattact gtgagaattt tctaagttaa tatatgtaaa gcaactttaa aaagtgcctg
3781 gcacttagtt attgttaagt aagtgtctgc agatgcaagt ttggaagaga aaagcaaata
3841 aatgaaaatc ccttcctgtt aagatgatgg ggtatttgga ttttttttta atactaaaaa
3901 gttttttttg ttatatgttt tggcaataaa taattctcaa tacaaaaaaa aaaaaaaaa
//