LOCUS BC068491 3396 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens protein phosphatase 4, regulatory subunit 4, mRNA
(cDNA clone MGC:87177 IMAGE:5297335), complete cds.
ACCESSION BC068491
VERSION BC068491.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3396)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3396)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: e Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17402883.
FEATURES Location/Qualifiers
source 1..3396
/db_xref="H-InvDB:HIT000263048"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87177 IMAGE:5297335"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3396
/gene="PPP4R4"
/gene_synonym="PP4R4"
/db_xref="GeneID:57718"
/db_xref="HGNC:HGNC:23788"
CDS 114..2735
/gene="PPP4R4"
/gene_synonym="PP4R4"
/codon_start=1
/product="protein phosphatase 4, regulatory subunit 4"
/protein_id="AAH68491.1"
/db_xref="GeneID:57718"
/db_xref="HGNC:HGNC:23788"
/translation="MHPPPPAAAMDFSQNSLFGYMEDLQELTIIERPVRRSLKTPEEI
ERLTVDEDLSDIERAVYLLSAGQDVQGTSVIANLPFLMRQNPTETLRRVLPKVREALH
VAGVEMQLTAAMSFLTILQDESVSIHAYTHSFLQVILLHLEHRDTGVSNAWLETLLSV
IEVLPKETLRHEILNPLVSKAQLSQTVQSRLVSCKILGKLTNKFDAHTIKREILPLVK
SLCQDVEYEVRSCMCRQLENIAQGIGTELTKSVVLPELIELSRDEGSSVRLAAFETLV
NLLDIFDTDDRSQTILPLVKSFCEKSFKADESILISLSFHLGKLCHGLYGIFTPDQHL
RFLEFYKKLCTLGLQQENGHNENQIPPQILEQEKKYISVRKNCAYNFPAMIVFVDPKN
FHMELYSTFFCLCHDPEVPVRYTIAICFYEVSKLLNSGVYLIHKELITLLQDESLEVL
DALIDHLPEILELMSTGGESSVQENKLSSLPDLIPALTAAEQRAAASLKWRTHEKLLQ
KYACLPHVISSDQIYYRFLQRMFTIMMTNNVLPVQKAASRTLCIFLRYNRKQEQRHEV
IQKLIEQLGQGKSYWNRLRFLDTCEFIIEIFSKSFFCKYFFLPAIELTHDPVANVRMK
LCYLLPKVKSTLKIPADKHLLQQLEMCVRKLLCQEKDKDVLAIVKRTVLELDRMEMSM
DAFQKKFYEKDLLDQEKEREELLLLEMEQLEKEKQQNDGRPMSDKMFEKKRRDTKTPT
QSLPKNIPISVPGPSSVTPSTSKEIKKSKLIRSQSFNNQAFHAKYGNLEKCASKSSTT
GYTTSVSGLGKTSVLSLADDSFRTRNASSVPSSFSPNTPLPSTSRGTGNSVDPKSSGS
KDTQPRKATLKSRKSNP"
BASE COUNT 1077 a 664 c 708 g 947 t
ORIGIN
1 ggctccagcg gccaagagcc ggagaaagtc ctgctggtgg gcggccgcgg ggctgagggc
61 gtccggcatc ccggggccgc tccggcccgg gcggcgagag tgcccggcgg tccatgcatc
121 cgccgccgcc cgccgccgcg atggatttca gtcagaacag cctgttcggt tacatggagg
181 acctgcagga gctcaccatc atcgagaggc cggtccgccg gagcctcaag acaccggaag
241 aaatagaaag attgacagtc gatgaagacc tcagtgatat tgaaagggct gtttatctgc
301 tcagtgctgg tcaagatgtc caaggaacaa gtgtgattgc aaatctccca tttttgatgc
361 gacagaatcc cactgagacg cttcggagag tgttgccaaa agtcagagaa gccctgcatg
421 ttgcaggagt ggaaatgcag ttaacggctg cgatgtcatt tctgaccatt ctgcaggacg
481 aatcagtgtc aattcatgca tatacccact cattcctcca agtcattctc ctgcatctgg
541 agcacaggga cacaggtgtc agcaatgcat ggctggaaac tcttctgtct gttatagaag
601 tattgccaaa agaaacccta cggcatgaga ttttgaatcc acttgtttcc aaggcacaac
661 tttcccaaac agtccagtct cgtttagtta gttgtaaaat tttaggaaaa ttgaccaaca
721 aatttgatgc ccacaccatt aagcgagaaa tacttcctct ggtaaaatca ctctgtcaag
781 atgtagaata tgaagttcga tcttgtatgt gtcggcaatt agaaaatata gcccagggca
841 ttgggacaga acttacaaaa agtgtggtgc tccctgaatt aatagaactt tctagggatg
901 aaggcagcag tgtacgactt gcagcttttg aaactttggt taatctgctt gatatatttg
961 atacagatga cagaagtcaa actatacttc ccttagtgaa atcattttgt gaaaaatctt
1021 tcaaagcaga tgaatcaatt cttatttctt tatctttcca tttaggaaaa ctatgtcatg
1081 gactatatgg aattttcact ccagatcagc acttgagatt tttggaattt tataagaaac
1141 tttgtacatt gggtttgcaa caagaaaatg gacacaatga aaaccagatt ccaccccaaa
1201 tcctagagca ggagaagaaa tatatttcag tacggaagaa ctgtgcttat aactttccgg
1261 ccatgattgt ttttgttgat cctaaaaact tccacatgga actctattct acattcttct
1321 gcctttgcca tgaccctgaa gtaccagtca gatacactat tgctatttgc ttttatgaag
1381 tatctaagct tctgaattct ggagtatatt taatacataa agaactaata acattattac
1441 aagatgaatc actggaggta ctagatgctc ttatagatca tcttccagaa atcttggaac
1501 ttatgtctac tggtggagaa agcagtgttc aagaaaataa gttatcttct ctgcctgact
1561 tgattccagc actcacagct gctgaacagc gagctgcagc ctctttaaaa tggagaactc
1621 atgagaagct acttcagaaa tatgcctgcc tgccacatgt catatcaagc gatcagattt
1681 attaccgttt cttacaaaga atgttcacaa tcatgatgac aaataatgtt ttacctgtcc
1741 aaaaggcggc ttcacgaact ctatgcattt ttctgcgtta taatcgtaaa caagaacaga
1801 gacatgaggt cattcaaaaa ttaattgaac aattgggcca aggaaaaagt tactggaata
1861 gacttcgatt tttggatacc tgtgaattta ttatagagat attttcaaaa tcatttttct
1921 gtaaatattt ctttctacct gctattgaac tgacacatga tccagtagca aatgtgagaa
1981 tgaaactttg ctacctgttg cccaaagtga aatctactct gaagattcct gctgataagc
2041 atctacttca gcagttagaa atgtgtgtga ggaaactcct gtgtcaagaa aaagataaag
2101 atgttctggc tattgtaaaa agaactgtat tagagttgga cagaatggaa atgtctatgg
2161 atgcttttca gaaaaagttt tatgagaaag atttgttgga tcaagagaaa gaaagagaag
2221 aactacttct tttggaaatg gaacaattag agaaagaaaa gcaacagaat gatggaaggc
2281 ccatgagtga taaaatgttt gaaaagaaac gtagagacac taagacacca acgcaaagtc
2341 tgcccaagaa catccccatt tctgttcctg gaccctcttc tgtcacccca tcgacaagta
2401 aagaaatcaa gaaatccaaa ctgattcgaa gccagtcttt taataatcaa gcttttcatg
2461 caaaatatgg caacttagag aaatgtgcta gtaaaagttc tacaacagga tatacaactt
2521 ctgtctcagg gttaggaaag acttctgtgc tttcactagc tgatgattca ttccggactc
2581 gtaatgccag tagcgttcca tcttcctttt ctcctaatac tcccttaccg agtacttccc
2641 gtgggacagg taactcagtt gaccccaaga gcagtggaag taaagataca caaccacgga
2701 aggctacctt aaaatccaga aaatccaatc cttaaatcaa ctgcttgatg aaggaggcaa
2761 aacaaaggca gcaggagata atgtgattgg tacacaaaag ctaaagcagt ggctggggct
2821 ttgtttttaa attttgggtt ttttttttgt tgttgttaat gagcagaaag agagacataa
2881 tgacagctga tgttaaactt ttcatatttc aaattagatt ccctaggagg tataatatat
2941 atttcttgag taataatgtg gttacggaat tccaatgtta tagtgaagtg taatgaaaaa
3001 catctctagg aatgtgcttt aaccactgct gcaaaagaga caagtctgca tttatttgtg
3061 caggaaacca gccatttaat tgttctagag ttttagcatt taaaaatcgt atgaaagtct
3121 acatcagctg aattgtccta gcttgataag cacttggagg gggacttgga aggtgagaaa
3181 gatactgcat tttctcatga gtctccaagc ccacttgaaa agtcacactg aaaggatgca
3241 aatagccgtc tgcgattttg gcggccctcc ggattgtggt gacaatatgt tgtacccgga
3301 cattcccaaa tttaaatttg gcagtgaaaa ttccacaaag atttctggta actttgagct
3361 ataaatacct taaaaataac aaaaaaaaaa aaaaaa
//