LOCUS BC068462 3210 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens carbonic anhydrase X, mRNA (cDNA clone MGC:87062
IMAGE:5260321), complete cds.
ACCESSION BC068462
VERSION BC068462.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3210)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3210)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: j Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48976057.
FEATURES Location/Qualifiers
source 1..3210
/db_xref="H-InvDB:HIT000263020"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87062 IMAGE:5260321"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3210
/gene="CA10"
/gene_synonym="CA-RPX"
/gene_synonym="CARPX"
/gene_synonym="HUCEP-15"
/db_xref="GeneID:56934"
/db_xref="HGNC:HGNC:1369"
/db_xref="MIM:604642"
CDS 946..1932
/gene="CA10"
/gene_synonym="CA-RPX"
/gene_synonym="CARPX"
/gene_synonym="HUCEP-15"
/codon_start=1
/product="carbonic anhydrase X"
/protein_id="AAH68462.1"
/db_xref="GeneID:56934"
/db_xref="HGNC:HGNC:1369"
/db_xref="MIM:604642"
/translation="MEIVWEVLFLLQANFIVCISAQQNSPKIHEGWWAYKEVVQGSFV
PVPSFWGLVNSAWNLCSVGKRQSPVNIETSHMIFDPFLTPLRINTGGRKVSGTMYNTG
RHVSLRLDKEHLVNISGGPMTYSHRLEEIRLHFGSEDSQGSEHLLNGQAFSGEVQLIH
YNHELYTNVTEAAKSPNGLVVVSIFIKVSDSSNPFLNRMLNRDTITRITYKNDAYLLQ
GLNIEELYPETSSFITYDGSMTIPPCYETASWIIMNKPVYITRMQMHSLRLLSQNQPS
QIFLSMSDNFRPVQPLNNRCIRTNINFSLQGKDCPNNRAQKLQYRVNEWLLK"
BASE COUNT 822 a 803 c 787 g 798 t
ORIGIN
1 tggggacccc tgcagttgta ttgcggaaaa tctcgacagc ggcgctagtt gcgggcgatg
61 gaagccaggc aactgggggt tctggggagt tcaggaaaat agcagaggag caggaagggc
121 gcgcgcgacc tggagagtct gtgtgccccc accgcgcccc agtccccggg gcccagccct
181 tcccctcggc gccctggacg cactgccgga acccggctga gaggctgcag gctgcgcgcg
241 gacctgggga gcagggaggg tcggcggagg ctgccggcgg ctggcggttt cgggcaataa
301 tccctgcctc tctttctctg tgtgtctact gtgtctgctc cttccccgcc ccccggaagc
361 aggagaagaa ctgccccgga gcgcagcagc caccctccga ccatgccccg gtgagggggg
421 cggacttcga gggcaacttg ccgcggactg cctgggctta gccagcgagc tacgcgctcc
481 cgggagcccg gaattgcacg gcgcagcccg gcggggggct atcgtctatg tcttcttggg
541 gcgcaagacg aatcggggtc tcgtttttgc tggaagagcc gagtgttggt ggcttcaggt
601 ggctgctgcc gccgccgccg ccgccgccgc tgctagtgcg gtttccgccg ctggtgcgaa
661 gagaagagac acgcgagcgg ggagacctcc aaggcagcga ggcatcggac atgtgtcagc
721 acatctgggg cgcacatccg tcgagcccga ggggagattt gccggaacaa ttcaaactgc
781 gatattgatc ttgggggtga ctgtccctgg ccggctgtcg ggtgggagtg cgagtgtgca
841 ctcgctcgga agtgtgtgcg agtgtgtatg tgtgtgtgcc gtgtcgggct ccccccttcc
901 ccccgttttc ccgtcgagtg atgcacttgg aatgagaatc agaggatgga aatagtctgg
961 gaggtgcttt ttcttcttca agccaatttc atcgtctgca tatcagctca acagaattca
1021 ccaaaaatcc atgaaggctg gtgggcatac aaggaggtgg tccagggaag ctttgttcca
1081 gttccttctt tctggggatt ggtgaactca gcttggaatc tttgctctgt ggggaaacgg
1141 cagtcgccag tcaacataga gaccagtcac atgatcttcg acccctttct gacacctctt
1201 cgcatcaaca cggggggcag gaaggtcagt gggaccatgt acaacactgg aagacacgta
1261 tcccttcgcc tggacaagga gcacttggtc aacatatctg gagggcccat gacatacagc
1321 caccggctgg aggagatccg actacacttt gggagtgagg acagccaagg gtcggagcac
1381 ctcctcaatg gacaggcctt ctctggggag gtgcagctca tccactataa ccatgagcta
1441 tatacgaatg tcacagaagc tgcaaagagt ccaaatggat tggtggtagt ttctatattt
1501 ataaaagttt ctgattcatc aaacccattt cttaatcgaa tgctcaacag agatactatc
1561 acaagaataa catataaaaa tgatgcatat ttactacagg ggcttaatat agaggaacta
1621 tatccagaga cctctagttt catcacttac gatgggtcga tgactatccc accctgctat
1681 gagacagcaa gttggatcat aatgaacaaa cctgtctata taaccaggat gcagatgcat
1741 tccttgcgcc tgctcagcca gaaccagcca tctcagatct ttctgagcat gagtgacaac
1801 ttcaggcctg tccagccact caacaaccgc tgcatccgca ccaatatcaa cttcagttta
1861 caggggaagg actgtccaaa caaccgagcc cagaagcttc agtatagagt aaatgaatgg
1921 ctcctcaagt agggaacaaa gccaagaaga atcccacctc agtgaaatgc tacaactgtg
1981 aattgacgta acctagaatg tcccccttct tgcttctctc tcattctttc ccccaagcct
2041 cattcattct tgggattggc cctttcttca tgaaaagtgt ctgcaaaacc atggcagagg
2101 aatacatctc tcacacatac tcacaaacac acacacaagc acttgcacat acatacaaac
2161 acatgcaaac atacctacac acacacacac tcttacaacc tccatcatgg gaagtcaagt
2221 ttcagaaaca aaagtctcat tcataagagg tcttagaaga aaataaccag ttaacctgat
2281 ttcaattttg ataccgtttt cctgaactaa taaatctacc caatgagact tttcagcctt
2341 tgtacataca aaattcttcc aaaagagaga ggagaaaata cagctctgat ggcatcaaac
2401 ggactttgca tcaagtaatt tcagatagtg tcctaggatc ctttgagggt gctggtagca
2461 ggtgagcagg acaaagttga ccaaggacac ttatttctag attatgattc ttctgtttac
2521 tcaacaattt acaaagaaaa aaaggacaga cattgaagag ctacacattg tatatatatc
2581 accacagact ataaggaaat ggaattattt ccctctttgt cacatatctg tagtaggatt
2641 tgccaagatc agaaatgatc catttgctgt ttcttgtttt ccaaaggtca tacattgtgt
2701 ttggttattg ttaccagctc aataaatgtg tttaacgagt taatttcatt tttctggctt
2761 tggtctgttc tccttcctta caggctaagc cctggctcca tgcaactgca ttctttgatt
2821 tcacttgttc cttcatctac atgttttgtt catttgcagc cagtttttac tgagtttgtg
2881 gcaatcagga atgcatttgc taagcaagta tgactttaat tccactccat ggctcaatca
2941 ttcacatgag gtgagcttca gcctgagata gcaggcgaca gacttcttgc gtttcaagac
3001 tgccatgccc ccctgtgatg ctcccgtgaa ggaatgcact ttgccttgta agttcctggg
3061 aaaggggtat gttttctctc caggtgcagc cagatctcac aaagtacaaa acgaatgcct
3121 ttcttttctt gtttataatg gtcactcact gtgtttggtt actgtcaaga aatcaataaa
3181 tgtgtttaac aagcaaaaaa aaaaaaaaaa
//