LOCUS BC068454 3257 bp mRNA linear HUM 21-JUL-2005 DEFINITION Homo sapiens programmed cell death 6 interacting protein, mRNA (cDNA clone MGC:87040 IMAGE:4830724), complete cds. ACCESSION BC068454 VERSION BC068454.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3257) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3257) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 167 Row: h Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 48255927. FEATURES Location/Qualifiers source 1..3257 /db_xref="H-InvDB:HIT000263012" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:87040 IMAGE:4830724" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3257 /gene="PDCD6IP" /gene_synonym="AIP1" /gene_synonym="Alix" /gene_synonym="DRIP4" /gene_synonym="HP95" /gene_synonym="MGC17003" /db_xref="GeneID:10015" /db_xref="MIM:608074" CDS 140..2761 /gene="PDCD6IP" /gene_synonym="AIP1" /gene_synonym="Alix" /gene_synonym="DRIP4" /gene_synonym="HP95" /gene_synonym="MGC17003" /codon_start=1 /product="PDCD6IP protein" /protein_id="AAH68454.1" /db_xref="GeneID:10015" /db_xref="MIM:608074" /translation="MATFISMQLKKTSEVDLAKPLVKFIQQTYPSGGEEQAQYCRAAE ELSKLRRAAVGRPLDKHEGALETLLRYYDQICSIEPKFPFSENQICLTFTWKDAFDKG SLFGGSVKLALASLGYEKSCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAF LHIKETVLSALSREPTVDISPDTVGTLSLIMLAQAQEVFFLKATRDKMKDAIIAKLAN QAADYFGDAFKQCQYKDTLPKYFYFQEVFPVLAAKHCIMQANAEYHQSILAKQQKKFG EEIARLQHAAELIKTVASRYDEYVNVKDFSDKINRALAAAKKDNDFIYHDRVPDLKDL DPIGKATLVKSTPVNVPISQKFTDLFEKMVPVSVQQSLAAYNQRKADLINRSIAQMRE ATTLANGVLASLNLPAAIEDVSGDTVPQSILTKSRSVIEQGGIQTVDQLIKELPELLQ RNREILDESLRLLDEEEATDNDLRAKFKERWQRTPSNELYKPLRAEGTNFRTVLDKAV QADGQVKECYQSHRDTIVLLCKPEPELNAAIPSANPAKTMQGSEVVNVLKSLLSNLDE VKKEREGLENDLKSVNFDMTSKFLTALAQDGVINEEALSVTELDRVYGGLTTKVQESL KKQEGLLKNIQVSHQEFSKMKQSNNEANLREEVLKNLATAYDNFVELVANLKEGTKFY NELTEILVRFQNKCSDIVFARKTERDELLKDLQQSIAREPSAPSIPTPAYQSSPAGGH APTPPTPAPRTMPPTKPQPPARPPPPVLPANRAPSATAPSPVGAGTAAPAPSQTPGSA PPPQAQGPPYPTYPGYPGYCQMPMPMGYNPYAYGQYNMPYPPVYHQSPGQAPYPGPQQ PSYPFPQPPQQSYYPQQ" BASE COUNT 980 a 724 c 713 g 840 t ORIGIN 1 ggtggacccg gaacgcaggc ggagcgcaag tctgtcagcc agtcagtccg ccagtccgcc 61 agcccagtac ctctctctcc tcggccctcg taagctgtcc gcggtctgtt tggcccgaac 121 ggcggcggag gcgctgatca tggcgacatt catctcgatg cagctgaaaa agacctcaga 181 ggtggacctg gccaagccgc tggtgaagtt catccagcag acttacccaa gcggcgggga 241 agagcaggcc cagtactgcc gcgcggcgga ggagctcagc aagctgcgcc gcgccgcagt 301 cggtcgtccg ctggacaagc acgagggcgc gctcgagacg ctcctgagat attatgatca 361 gatttgttct attgaaccca aattcccatt ttctgaaaat cagatctgct tgacatttac 421 ctggaaggat gctttcgata aaggttcact ttttggaggc tctgtaaaac tggctcttgc 481 aagcttagga tatgaaaaga gctgtgtgtt gttcaattgt gcagccttag ctagccaaat 541 tgcagcagaa cagaacctgg ataatgatga aggattgaaa atcgctgcta aacattacca 601 gtttgctagt ggtgcctttt tacatattaa agagacggtt ttatctgcct taagtcgaga 661 gccgaccgtg gacatatctc cagatactgt tgggaccctc agtcttatta tgctggcaca 721 ggctcaagaa gtattttttt taaaagccac aagagataaa atgaaagatg ccatcatagc 781 taaattggct aatcaggctg cagattattt tggtgatgct ttcaaacagt gtcaatacaa 841 agatactctc cccaagtatt tttatttcca ggaggtgttc cctgtcttgg ctgcaaagca 901 ctgtatcatg caggccaatg ctgagtacca tcagtctatc ctggcaaaac agcagaagaa 961 atttggagaa gaaattgcaa ggttacagca tgcagcagaa ctgattaaaa cagtggcatc 1021 tcgctatgat gaatatgtta atgtgaagga tttttctgac aaaatcaatc gtgcccttgc 1081 tgcagcaaag aaggataatg acttcattta tcatgatcga gttccagacc ttaaagatct 1141 agatcctatt ggcaaagcca cacttgtgaa atctaccccg gtcaatgtac ccatcagtca 1201 gaaatttact gatctgtttg agaagatggt tcccgtgtca gtacagcagt ctttggctgc 1261 ctataatcag aggaaagccg atttgattaa cagatcaatt gctcagatga gagaagccac 1321 cactttggca aatggggtgc tagcttccct taatcttcca gcagcaattg aagatgtgtc 1381 tggagacact gtacctcagt ctatattgac taaatccaga tctgtgattg aacagggagg 1441 catccagact gttgatcagt tgattaaaga actgcctgaa ttactgcaac gaaatagaga 1501 aatcctagat gagtcattaa ggttgttgga tgaagaagaa gcaaccgata atgatttaag 1561 agcaaaattt aaggaacgtt ggcaaaggac accatccaat gaactgtata agcctttaag 1621 agcagaggga accaacttca gaacagtttt agataaagct gtgcaggcag atggacaagt 1681 gaaagaatgc taccagtctc atcgtgacac catcgtgctt ttgtgtaagc cagagcctga 1741 gctgaatgct gccatccctt ctgctaatcc agcaaagacc atgcagggca gtgaggttgt 1801 aaatgtctta aaatccttat tgtcaaatct tgatgaagta aagaaggaaa gagagggtct 1861 ggagaatgac ttgaaatctg tgaattttga catgacaagc aagtttttga cagccctggc 1921 tcaagatggt gtgataaatg aagaagctct ttctgttact gaactagatc gagtctatgg 1981 aggtcttaca actaaagtcc aagaatctct aaagaaacag gagggacttc ttaaaaatat 2041 tcaggtctca catcaggaat tttcaaaaat gaaacaatct aataatgaag ctaacttaag 2101 agaagaagtt ttgaagaatt tagctactgc atatgacaac tttgttgaac ttgtagctaa 2161 tttgaaggaa ggcacaaagt tttacaatga gttgactgaa atcctggtca ggttccagaa 2221 caaatgcagt gatatagttt ttgcacggaa gacagaaaga gatgaactct taaaggactt 2281 gcaacaaagc attgccagag aacctagtgc tccttcaatt cctacacctg cgtatcagtc 2341 ctcaccagca ggaggacatg caccaactcc tccaactcca gcgccaagaa ccatgccgcc 2401 tactaagccc cagcccccag ccaggcctcc accacctgtg cttccagcaa atcgagctcc 2461 ttctgctact gctccatctc cagtgggggc tgggactgct gcgccagctc catcacaaac 2521 gcctggctca gctcctcctc cacaggcgca gggaccaccc tatcccacct atccaggata 2581 tcctgggtat tgccaaatgc ccatgcccat gggctataat ccttatgcgt atggccagta 2641 taatatgcca tatccaccag tgtatcacca gagtcctgga caggctccat acccgggacc 2701 ccagcagcct tcatacccct tccctcagcc cccacagcag tcttactatc cacagcagta 2761 atatgtctgc tcagcagctc agctgattca gatcagaggg aaagaaatac caaccctgca 2821 ataagtgtac taaactctac gctctggtta atgtaatgta ctctcctgga ctgaatgcag 2881 tgtataattt ctgtctacag ctagaagctg tgccccagtt ccacatttga ttacacatgt 2941 gagatttgct gctgttgcag tataaacact aggtataata ggatttgaaa ttgcattaca 3001 gttcataaaa attgaaaatg agaaattaaa cctgcaagtg aaacatttga aacgattata 3061 ctttctacat aagacatggt tgggacatca gatacttaca aagatggttt aagtatggat 3121 actagagaaa attaagtttt ctttctcttt ggtttattga tttggtttaa tttccattat 3181 gctattttgc ataatcaagg cactgtaaat cttataattt taaaataaat tacttaagaa 3241 caaaaaaaaa aaaaaaa //