LOCUS BC068260 2214 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens proline dehydrogenase (oxidase) 1, mRNA (cDNA clone
IMAGE:5311991), partial cds.
ACCESSION BC068260
VERSION BC068260.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2214)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2214)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: m Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19924110.
FEATURES Location/Qualifiers
source 1..2214
/db_xref="H-InvDB:HIT000262985"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5311991"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..2214
/gene="PRODH"
/gene_synonym="HSPOX2"
/gene_synonym="PIG6"
/gene_synonym="PRODH1"
/gene_synonym="PRODH2"
/gene_synonym="SCZD4"
/gene_synonym="TP53I6"
/db_xref="GeneID:5625"
/db_xref="MIM:606810"
CDS <1..1808
/gene="PRODH"
/gene_synonym="HSPOX2"
/gene_synonym="PIG6"
/gene_synonym="PRODH1"
/gene_synonym="PRODH2"
/gene_synonym="SCZD4"
/gene_synonym="TP53I6"
/codon_start=3
/product="PRODH protein"
/protein_id="AAH68260.1"
/db_xref="GeneID:5625"
/db_xref="MIM:606810"
/translation="RHGSEARPARAAPLHSPLRPAVHGAGLPRAARSGPSGRARRWVG
HGSAAAGARRGLRQRAGGVPQPANLGAGAEPAGAALVRLARAAGAPRAAAVCFQETSR
TEAIQQAHEDDLLWAFCSRGGRESIQPLLRHYRAFGVSAILDYGVEEDLSPEEAEHKE
MESCTSAAERDGSGTNKRDKQYQAHRAFGDRRNGVISARTYFYANEAKCDSHMETFLR
CIEASGRVSDDGFIAIKLTALGRPQFLLQFSEVLAKWRCFFHQMAVEQGQAGLAAMDT
KLEVAVLQESVAKLGIASRAEIEDWFTAETLGVSGTMDLLDWSSLIDSRTKLSKHLVV
PNAQTGQLEHLLSRFTEEEELQMTRMLQRMDVLAKKATEMGVRLMVDAEQTYFQPAIS
RLTLEMQRKFNVEKPLIFNTYQCYLKDAYDNVTLDVELARREGWCFGAKLVRGAYLAQ
ERARAAEIGYEDPINPTYEATNAMYHRCLDYVLEELKHNAKAKVMVASHNEDTVRFAL
RRMEELGLHPADHQVYFGQLLGMCDQISFPLGQAGYPVYKYVPYGPVMEVLPYLSRRA
LENSSLMKGTHRERQLLWLELLRRLRTGNLLHRPA"
BASE COUNT 451 a 691 c 693 g 379 t
ORIGIN
1 cccgccatgg ctctgaggcg cgccctgccc gcgctgcgcc cctgcattcc ccgcttcgtc
61 cagctgtcca cggcgccggc ctcccgcgag cagcccgcag cgggcccagc ggccgtgcca
121 ggaggtgggt cggccacggc agtgcggccg ccggtgcccg ccgtggactt cggcaacgcg
181 caggaggcgt accgcagccg gcgaacctgg gagctggcgc ggagcctgct ggtgctgcgc
241 ttgtgcgcct ggcccgcgct gctggcgcgc cacgagcagc tgctgtatgt ttccaggaaa
301 cttctaggac agaggctatt caacaagctc atgaagatga ccttctatgg gcattttgta
361 gccggggagg acgggagtcc atccagcccc tgcttcggca ctacagggcc ttcggtgtca
421 gcgccatcct ggactatgga gtggaggagg acctgagccc cgaggaggca gagcacaagg
481 agatggagtc ctgcacctca gctgcggaga gggatggcag tggcacgaat aagcgggaca
541 agcaatacca ggcccaccgg gccttcgggg accgcaggaa tggtgtcatc agtgcccgca
601 cctacttcta cgccaatgag gccaagtgcg acagccacat ggagacattc ttgcgctgca
661 tcgaagcctc aggtagagtc agcgatgacg gcttcatagc cattaagctc acagcactgg
721 ggagacccca gtttctgctg cagttctcag aggtgctggc caagtggagg tgcttctttc
781 accaaatggc tgtggagcaa gggcaggcgg gcctggctgc catggacacc aagctggagg
841 tggcggtgct gcaggaaagt gtcgcaaagt tgggcatcgc atccagggct gagattgagg
901 actggttcac ggcagagacc ctgggagtgt ctggcaccat ggacctgctg gactggagca
961 gcctcatcga cagcaggacc aagctgtcca agcacctggt agtccccaac gcacagacag
1021 gacagctgga gcacctgctg tcccggttca ctgaggagga ggagctacag atgaccagga
1081 tgctacagcg gatggatgtc ctggccaaga aagccacaga gatgggcgtg cggctgatgg
1141 tggatgccga gcagacctac ttccagccgg ccatcagccg cctgacgctg gagatgcagc
1201 ggaagttcaa tgtggagaag ccgctcatct tcaacacata ccagtgctac ctcaaggatg
1261 cctatgacaa tgtgaccctg gatgtggagc tggctcgccg tgagggctgg tgttttgggg
1321 ccaagctggt gcggggcgca tacctggccc aggagcgagc ccgtgcggca gagatcggct
1381 atgaggaccc catcaacccc acgtacgagg ccaccaacgc catgtaccac aggtgcctgg
1441 actacgtgtt ggaggagctg aagcacaacg ccaaggccaa ggtgatggtg gcctcccaca
1501 atgaggacac agtgcgcttc gcactgcgca ggatggagga gctgggcctg catcctgctg
1561 accaccaggt gtactttgga cagctgctag gcatgtgtga ccagatcagc ttcccgctgg
1621 gccaggccgg ctaccccgtg tacaagtacg tgccctatgg ccccgtgatg gaggtgctgc
1681 cctacttgtc ccgccgtgcc ctggagaaca gcagcctcat gaagggcacc catcgggagc
1741 ggcagctgct gtggctggag ctcttgaggc ggctccgaac tggcaacctc ttacatcgcc
1801 ctgcctagca cccgccagca caccctcagc ctccagcacc ccccgccccc gcccaggcca
1861 tcaccacagc tgcagccaac cccatcctca cacagattca ccttttttca ccccacactt
1921 gcagagctgc tggaggtgag gtcaggtgcc tcccagccct gcccagagta tgggcactca
1981 ggtgtgggcc gaacctgata cctgcctggg acagccactg gaaacttttg ggaactctcc
2041 tcgaatgtgt gggcccaagg cccacctctg tgacccccat gtccttggac ctagaggatt
2101 gtccaccttc tgccaaggcc agcccacaca gcccgagccc cttggggagc agtggccggg
2161 ctggggaggc ctgcctggtc aataaaccac tgttcctgca aaaaaaaaaa aaaa
//