LOCUS BC068197 1157 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class
L, mRNA (cDNA clone MGC:71885 IMAGE:6711166), complete cds.
ACCESSION BC068197
VERSION BC068197.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1157)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1157)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: o Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24430188.
FEATURES Location/Qualifiers
source 1..1157
/db_xref="H-InvDB:HIT000262968"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71885 IMAGE:6711166"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_128"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1157
/gene="PIGL"
/db_xref="GeneID:9487"
/db_xref="HGNC:HGNC:8966"
/db_xref="MIM:605947"
CDS 12..770
/gene="PIGL"
/codon_start=1
/product="phosphatidylinositol glycan anchor biosynthesis,
class L"
/protein_id="AAH68197.1"
/db_xref="GeneID:9487"
/db_xref="HGNC:HGNC:8966"
/db_xref="MIM:605947"
/translation="MEAMWLLCVALAVLAWGFLWVWDSSERMKSREQGGRLGAESRTL
LVIAHPDDEAMFFAPTVLGLARLRHWVYLLCFSAGNYYNQGETRKKELLQSCDVLGIP
LSSVMIIDNRDFPDDPGMQWDTEHVARVLLQHIEVNGINLVVTFDAGGVSGHSNHIAL
YAAVRALHSEGKLPKGCSVLTLQSVNVLRKYISLLDLPLSLLHTQDVLFVLNSKEVAQ
AKKAMSCHRSQLLWFRRLYIIFSRYMRINSLSFL"
BASE COUNT 320 a 288 c 294 g 255 t
ORIGIN
1 ggggacccat catggaagca atgtggctcc tgtgtgtggc gttggcggtc ttggcatggg
61 gcttcctctg ggtttgggac tcctcagaac gaatgaagag tcgggagcag ggaggacggc
121 tgggagccga aagccggacc ctgctggtca tagcgcaccc tgacgatgaa gccatgtttt
181 ttgctcccac agtgctaggc ttggcccgcc taaggcactg ggtgtacctg ctttgcttct
241 ctgcaggaaa ttactacaat caaggagaga ctcgtaagaa agaacttttg cagagctgtg
301 atgttttggg gattccactc tccagtgtaa tgattattga caacagggat ttcccagatg
361 acccaggcat gcagtgggac acagagcacg tggccagagt cctccttcag cacatagaag
421 tgaatggcat caatctggtg gtgactttcg atgcaggggg agtaagtggc cacagcaatc
481 acattgctct gtatgcagct gtgagggccc tgcactcaga agggaagtta cctaaagggt
541 gctctgtgct cacgcttcag tctgtgaatg tgctgcgcaa gtacatctcc cttctggatc
601 tgcccttgtc tctgcttcat acgcaggatg tcctcttcgt gctcaacagc aaagaagtgg
661 cacaggccaa gaaagccatg tcctgccacc gcagccagct cctctggttc cgccgcctct
721 acattatctt ctcccggtac atgagaatca actcactgag cttcctctga agccttgaag
781 ggttttcaga tccaaggaac aaaggggaaa atagacaaag gagtgcagag gacctggcct
841 ggcactggct tatttacctg agctcaagga gatccccgct ggagcagcct ctgcaaaagg
901 gagcccatgt aggccagggg ctgtccaaac tccagcttct tcccctggga aaaaacccaa
961 agaaccaaaa acaaaccacc ccaaggataa taatagctac actgctagct tctcaagttc
1021 ttgtgaaaaa caatttacat aatgacacag tagatgtgga acacctagcc cagtgcctgg
1081 gcaggtccct attatcataa atgaacataa aagtgctcta aaaacgcaaa aaaaaaaaaa
1141 aaaaaaaaaa aaaaaaa
//