LOCUS BC068062 1018 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ribosomal protein SA, mRNA (cDNA clone MGC:78527
IMAGE:5427114), complete cds.
ACCESSION BC068062
VERSION BC068062.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1018)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1018)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 54 Row: f Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 59859884.
FEATURES Location/Qualifiers
source 1..1018
/db_xref="H-InvDB:HIT000262922"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:78527 IMAGE:5427114"
/tissue_type="Brain, astrocytoma, grade IV"
/clone_lib="NIH_MGC_98"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..1018
/gene="RPSA"
/gene_synonym="37LRP"
/gene_synonym="67LR"
/gene_synonym="LAMBR"
/gene_synonym="LRP"
/gene_synonym="p40"
/db_xref="GeneID:3921"
/db_xref="HGNC:HGNC:6502"
/db_xref="MIM:150370"
CDS 44..931
/gene="RPSA"
/gene_synonym="37LRP"
/gene_synonym="67LR"
/gene_synonym="LAMBR"
/gene_synonym="LRP"
/gene_synonym="p40"
/codon_start=1
/product="ribosomal protein SA"
/protein_id="AAH68062.1"
/db_xref="GeneID:3921"
/db_xref="HGNC:HGNC:6502"
/db_xref="MIM:150370"
/translation="MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSD
GIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGR
FTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIA
IPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAA
EKAVTKEEFQGEWTAPAPEFTATQPEVADWSEGVQVPSVPIQQFPTEDWSAQPATEDW
SAAPTAQATEWVGATTDWS"
BASE COUNT 264 a 252 c 257 g 245 t
ORIGIN
1 gttgttctgg attcccgtcg taacttaaag ggaaactttc acaatgtccg gagcccttga
61 tgtcctgcaa atgaaggagg aggatgtcct taagttcctt gcagcaggaa cccacttagg
121 tggcaccaat cttgacttcc agatggaaca gtacatctat aaaaggaaaa gtgatggcat
181 ctatatcata aatctcaaga ggacctggga gaagcttctg ctggcagctc gtgcaattgt
241 tgccattgaa aaccctgctg atgtcagtgt tatatcctcc aggaatactg gccagagggc
301 tgtgctgaag tttgctgctg ccactggagc cactccaatt gctggccgct tcactcctgg
361 aaccttcact aaccagatcc aggcagcctt ccgggagcca cggcttcttg tggttactga
421 ccccagggct gaccaccagc ctctcacgga ggcatcttat gttaacctac ctaccattgc
481 gctgtgtaac acagattctc ctctgcgcta tgtggacatt gccatcccat gcaacaacaa
541 gggagctcac tcagtgggtt taatgtggtg gatgctggct cgggaagttc tgcgcatgcg
601 tggcaccatt tcccgtgaac acccatggga ggtcatgcct gatctgtact tctacagaga
661 tcctgaagag attgaaaaag aagagcaggc tgctgctgag aaggcagtga ccaaggagga
721 atttcagggt gaatggactg ctcccgctcc tgagttcact gctactcagc ctgaggttgc
781 agactggtct gaaggtgtac aggtgccctc tgtgcctatt cagcaattcc ctactgaaga
841 ctggagcgct cagcctgcca cggaagactg gtctgcagct cccactgctc aggccactga
901 atgggtagga gcaaccactg actggtctta agctgttctt gcataggctc ttaagcagca
961 tggaaaaatg gttgatggaa aataaacatc agtttctaaa aaaaaaaaaa aaaaaaaa
//