LOCUS BC068046 1463 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens heat shock protein, alpha-crystallin-related, B6, mRNA
(cDNA clone MGC:78426 IMAGE:6074542), complete cds.
ACCESSION BC068046
VERSION BC068046.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1463)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1463)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 54 Row: h Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21389432.
FEATURES Location/Qualifiers
source 1..1463
/db_xref="H-InvDB:HIT000262907"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:78426 IMAGE:6074542"
/tissue_type="Skin, melanoma, melanotic"
/clone_lib="NIH_MGC_112"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1463
/gene="HSPB6"
/gene_synonym="FLJ32389"
/gene_synonym="Hsp20"
/db_xref="GeneID:126393"
/db_xref="HGNC:HGNC:26511"
CDS 10..492
/gene="HSPB6"
/gene_synonym="FLJ32389"
/gene_synonym="Hsp20"
/codon_start=1
/product="heat shock protein, alpha-crystallin-related,
B6"
/protein_id="AAH68046.1"
/db_xref="GeneID:126393"
/db_xref="HGNC:HGNC:26511"
/translation="MEIPVPVQPSWLRRASAPLLGLSAPGRLFDQRFGEGLLEAELAA
LCPTTLAPYYLRAPSVALPVAQVPTDPGHFSVLLDVKHFSPEEIAVKVVGEHVEVHAR
HEERPDEHGFVAREFHRRYRLPPGVDPAAVTSALSPEGVLSIQAAPASAQAPPPAAAK
"
BASE COUNT 286 a 602 c 304 g 271 t
ORIGIN
1 aggagcagga tggagatccc tgtgcctgtg cagccgtctt ggctgcgccg cgcctcggcc
61 ccgttgctcg gactttcggc gcccggacgc ctctttgacc agcgcttcgg cgaggggctg
121 ctggaggccg agctggctgc gctctgcccc accacgctcg ccccctacta cctgcgcgca
181 cccagcgtgg cgctgcccgt cgcccaggtg ccgacggacc ccggccactt ttcggtgctg
241 ctagacgtga agcacttctc gccggaggaa attgctgtca aggtggtggg cgaacacgtg
301 gaggtgcacg cgcgccacga ggagcgcccg gatgagcacg gattcgtcgc gcgcgagttc
361 caccgtcgct accgcctgcc gcctggcgtg gatccggctg ccgtgacgtc cgcgctgtcc
421 cccgagggcg tcctgtccat ccaggccgca ccagcgtcgg cccaggcccc accgccagcc
481 gcagccaagt aggagggggc tgggccgcgc ccgcaccccg ggagcctcct caggctccct
541 ctattaaagc cgatctgact ccgcccagcc agatgtcccg agtgcgccaa ggactgtcct
601 ctcacccact cctggattct gccctgacct ccatcctgga cactgccttg ataacataga
661 cccttccact gacaccctcg ctctcacacc ccctccagct ttccgacccc acaccgacaa
721 ctccccggct tccagaccct accagcacta ccctaaccct cagccgacag tctcagcccc
781 accgacccac tttcttggca tatagcccca cttaagaccc ctcctctact tccttctgag
841 tcctctacaa agacatccgg gtactacatt tccatccctt ccctattttg acaccaaatt
901 atggtgtaga cagccctccc ccaaccccag gccagtcagg cacaatcccc ccacccccca
961 aacgtcctgg actgcacaga cctcccactc cagaccatcc aggcctggtt cccaagaccc
1021 gatccttccc ctgcaaccag acagtctaca actgccccct ccagcccatt ttctgccgtg
1081 aaaccccagc cagccacacc agactctgga accctttttc gactgcccca actcttggac
1141 accaggccaa ctagaacacc caacaccaaa ctgtacagac tctcccaccc caacctcccc
1201 agactctgca cggatgtcct aggccccctc cccaactcta accagacccc atccccctaa
1261 gtccctttgt cttgaccccc aagtcttcaa ccagatatcc tcggcaaccc acctcccacc
1321 ctcctcctct tctccttcaa gacccaactg agcacccgct ctgattcccc acagcctttc
1381 tccctgccac cactccctta gtctttccca ggcttactct cccaataaat gtgctagagc
1441 tctgcaaaaa aaaaaaaaaa aaa
//