LOCUS BC067799 2399 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens chromosome 10 open reading frame 97, mRNA (cDNA clone
MGC:87256 IMAGE:5278533), complete cds.
ACCESSION BC067799
VERSION BC067799.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2399)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2399)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: a Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56676388.
FEATURES Location/Qualifiers
source 1..2399
/db_xref="H-InvDB:HIT000262767"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87256 IMAGE:5278533"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2399
/gene="C10orf97"
/gene_synonym="CARP"
/gene_synonym="DERP5"
/gene_synonym="FLJ13397"
/gene_synonym="MST126"
/gene_synonym="MSTP126"
/gene_synonym="my042"
/gene_synonym="RP11-394I23.1"
/db_xref="GeneID:80013"
/db_xref="HGNC:HGNC:23578"
CDS 221..1558
/gene="C10orf97"
/gene_synonym="CARP"
/gene_synonym="DERP5"
/gene_synonym="FLJ13397"
/gene_synonym="MST126"
/gene_synonym="MSTP126"
/gene_synonym="my042"
/gene_synonym="RP11-394I23.1"
/codon_start=1
/product="chromosome 10 open reading frame 97"
/protein_id="AAH67799.1"
/db_xref="GeneID:80013"
/db_xref="HGNC:HGNC:23578"
/translation="MSELTKELMELVWGTKSSPGLSDTIFCRWTQGFVFSESEGSALE
QFEGGPCAVIAPVQAFLLKKLLFSSEKSSWRDCSEEEQKELLCHTLCDILESACCDHS
GSYCLVSWLRGKTTEETASISGSPAESSCQVEHSSALAVEELGFERFHALIQKRSFRS
LPELKDAVLDQYSMWGNKFGVLLFLYSVLLTKGIENIKNEIEDASEPLIDPVYGHGSQ
SLINLLLTGHAVSNVWDGDRECSGMKLLGIHEQAAVGFLTLMEALRYCKVGSYLKSPK
FPIWIVGSETHLTVFFAKDMALVAPEAPSEQARRVFQTYDPEDNGFIPDSLLEDVMKA
LDLVSDPEYINLMKNKLDPEGLGIILLGPFLQEFFPDQGSSGPESFTVYHYNGLKQSN
YNEKVMYVEGTAVVMGFEDPMLQTDDTPIKRCLQTKWPYIELLWTTDRSPSLN"
BASE COUNT 709 a 465 c 478 g 747 t
ORIGIN
1 aggggcacca gcacttccgg tacggaaaac tcgctgctgc cccaacctgg cttgacaggc
61 ttggtctctg caagtggctc tcagcccctt cttctttcct gcctcacctt ccaattcgtt
121 tgccgccgcc gtcccgcagc tgctgtttcc ggagttgccc cttccccatg ttcaggggca
181 ggagtccgca aagcgaagat ccgcccgccg gttcctcatc atgtccgaac tgactaaaga
241 gctgatggag ctggtgtggg gcaccaagag cagccccggt ctctcggaca ccattttctg
301 ccgctggacg caagggtttg tgtttagtga atcagaggga tctgcattag aacagtttga
361 aggtggcccc tgtgctgtta ttgcacctgt tcaggcattt cttttgaaga agctcctgtt
421 ttcttcggag aagtcttctt ggcgggattg ttcagaggaa gagcagaagg aactcctttg
481 tcataccttg tgtgatattt tagaaagtgc ttgttgtgac cactctggat catactgctt
541 ggtttcatgg ttaagaggaa agacaactga ggaaactgct agtatttctg ggagtcctgc
601 agagtctagt tgccaagtgg aacattcttc tgccttggct gtcgaagagc ttggctttga
661 gcgatttcat gcattaattc aaaaaagatc gttcagaagt ttaccagaat taaaagatgc
721 tgtcttggac cagtattcaa tgtggggaaa taaatttgga gtattgcttt ttctgtattc
781 tgtattactg acaaagggca ttgaaaacat aaaaaacgaa attgaagatg caagtgaacc
841 cttgatagat cctgtatatg gacatggcag ccaaagttta attaatctcc tgctgacggg
901 acatgctgtt tctaatgtat gggatggtga tagagagtgc tcaggaatga aacttcttgg
961 tatacatgaa caagcagcag taggattttt aacactaatg gaagctttaa gatactgtaa
1021 ggttggttct tacttgaaat ctccaaaatt ccctatttgg attgttggca gtgagactca
1081 cctcaccgta ttttttgcca aggatatggc tttagttgcc cctgaagctc cttcagaaca
1141 agccagaaga gtttttcaaa cctacgaccc agaagataat ggattcatac ccgattcact
1201 tctggaagat gtgatgaaag cattggacct tgtttcagat cctgaatata taaatctcat
1261 gaagaataaa ttagatccag aaggattagg aatcatatta ttgggcccat ttcttcaaga
1321 attttttcct gatcagggct ccagtggtcc agaatctttt actgtctacc actacaatgg
1381 attgaagcag tcaaattata atgaaaaggt catgtacgta gaagggactg cagttgtgat
1441 gggttttgaa gatcccatgc tacagacaga tgacactcct attaaacgct gtctgcaaac
1501 caaatggcca tacattgagt tactctggac cacagatcgc tctccttcac taaattaatt
1561 tgtctaagta tttataagga agatcttaat aacagatgtt gaaagaagga gtcaagactg
1621 gcaattggct ggattaagct aaacactggt atcactgatt aactgtaaat aacaattaaa
1681 aacacatttt cagtgtttat gatatgttta aattatttgt cctaaagctt tatgttaaag
1741 attatcctat tttacccctt cgtgtgaaat ttactagcaa aattaagctt tcatcaaagt
1801 tcatcacttt tgcattcaga tacttggtca tttacttacc aaattacaaa cgcaatacta
1861 cagcatttgt atattaagta tcacagttac tattgataaa ctacttttgg gttttatttc
1921 attgaggcac tttttttatt gtttgaatga ttccggcttg taatatatca gcctctacaa
1981 tgaaatgcag aagagttcat ttttctaaga tctgtttttc attagaaata ttgacaaata
2041 acacattgtc aacctggatc ctttgacaat ttacttaact ctggcatgtt cacaaaaagt
2101 agaaactcta agagaccatt accatctatt cacagatgta taggggatgt attctaaaaa
2161 ctgacagaaa agagaatctg atagtcaaca ctgttaactt ttactgtgta attgccaaat
2221 acacttttcc aaatttgtcc caacagccct gtaagccagc tttcttctat atttataaac
2281 acgataaatg catgagaaga tctgttatta cattagtata ttacgttatt tattatgatc
2341 ctagttgatt gcctaaataa acaccttttt ctttaaaaaa aagaaaaaaa aaaaaaaaa
//