LOCUS BC067781 2081 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens sphingosine-1-phosphate receptor 5, mRNA (cDNA clone
MGC:87172 IMAGE:5286249), complete cds.
ACCESSION BC067781
VERSION BC067781.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2081)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2081)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: b Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46198302.
FEATURES Location/Qualifiers
source 1..2081
/db_xref="H-InvDB:HIT000262749"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87172 IMAGE:5286249"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2081
/gene="S1PR5"
/gene_synonym="Edg-8"
/gene_synonym="S1P5"
/gene_synonym="SPPR-1"
/gene_synonym="SPPR-2"
/db_xref="GeneID:53637"
/db_xref="HGNC:HGNC:14299"
/db_xref="MIM:605146"
CDS 73..1005
/gene="S1PR5"
/gene_synonym="Edg-8"
/gene_synonym="S1P5"
/gene_synonym="SPPR-1"
/gene_synonym="SPPR-2"
/codon_start=1
/product="S1PR5 protein"
/protein_id="AAH67781.1"
/db_xref="GeneID:53637"
/db_xref="HGNC:HGNC:14299"
/db_xref="MIM:605146"
/translation="MESGLLRPAPVSEVIVLHYNYTGKLRGARYQPGAGLRADAVVCL
AVCAFIVLENLAVLLVLGRHPRFHAPMFLLLGSLTLSDLLAGAAYAANILLSGPLTLK
LSPALWFAREGGVFVALTASVLSLLAIALERSLTMARRGPAPVSSRGRTLAMAAAAWG
VSLLLGLLPALGWNCLGRLDACSTVLPLYAKAYVLFCVLAFVGILAAICALYALAGLA
AHAQRGAPGLCGMLGPPHPAAVARRGVPGAHLSCTPAGRSLPGTGHGQLTSEPHHLHA
HQPRPAPRAPAPGLLRTPLLRQRPEWLPAVGERG"
BASE COUNT 430 a 594 c 643 g 414 t
ORIGIN
1 ggtcactcgg ttcaaggcag cgcgactgcg ggtggcgcac gaccagggcg cagaccttgg
61 ggcgcgcggc ccatggagtc ggggctgctg cggccggcgc cggtgagcga ggtcatcgtc
121 ctgcattaca actacaccgg caaactccgc ggtgcgcgct accagccggg tgccggcctg
181 cgcgccgacg ccgtggtgtg cctggcggtg tgcgccttca tcgtgctaga gaatctagcc
241 gtgttgttgg tgctcggacg ccacccgcgc ttccacgctc ccatgttcct gctcctgggc
301 agcctcacgt tgtcggatct gctggcaggc gccgcctacg ccgccaacat cctactgtcg
361 gggccgctca cgctgaaact gtcccccgcg ctctggttcg cacgggaggg aggcgtcttc
421 gtggcactca ctgcgtccgt gctgagcctc ctggccatcg cgctggagcg cagcctcacc
481 atggcgcgca gggggcccgc gcccgtctcc agtcgggggc gcacgctggc gatggcagcc
541 gcggcctggg gcgtgtcgct gctcctcggg ctcctgccag cgctgggctg gaattgcctg
601 ggtcgcctgg acgcttgctc cactgtcttg ccgctctacg ccaaggccta cgtgctcttc
661 tgcgtgctcg ccttcgtggg catcctggcc gcgatctgtg cactctacgc gctcgctggc
721 cttgctgcgc acgctcagcg tggtgctcct ggcctttgtg gcatgttggg gccccctcat
781 cctgctgctg ttgctcgacg tggcgtgccc ggcgcgcacc tgtcctgtac tcctgcaggc
841 cgatcccttc ctgggactgg ccatggccaa ctcacttctg aaccccatca tctacacgct
901 caccaaccgc gacctgcgcc acgcgctcct gcgcctggtc tgctgcggac gccactcctg
961 cggcagagac ccgagtggct cccagcagtc ggcgagcgcg gctgaggctt ccgggggcct
1021 gcgccgctgc ctgcccccgg gccttgatgg gagcttcagc ggctcgtagc gctcatcgcc
1081 ccagcgcgac gggctggaca ccagcggctc cacaggcagc cccggtgcac ccacagccgc
1141 ccggactctg gtatcagaac cggctgcaga ctgacaccct cggcccacgg ctgtcttccc
1201 aagttttaca gacttgttct ttttacataa aggaatttgt aggaaatgca gccaaaggtg
1261 cagtcggaaa agatgcaggg gaaatgtatt tatgcagcga caccccacaa tgtgaacaaa
1321 cagacaaaaa atctgtgccc tcgtggaatt gacgttctgc ttgggaacac agaaaagaac
1381 tcggtgatga aataatggag atgattccag tgacaaacga cagagatggt gatggtggtc
1441 agggaagacc tctctgcaga ggtagtgact tgtgatgtga gctgagacct ctgtcctggg
1501 aagaccaaaa gaaaagcatt tcaggatgag ggaatggcat gcgcaaaggc cctgaggctg
1561 aaatgtgccc atgtgttcta agaaatgcag cgatgctggt gtgcctggag cagggacgga
1621 gggggagaat gggaggagac aaggagctga aggagtagtt cccgaaggac cttgtgggtg
1681 atatagagga cttcgctttt gctctgagtg aggtgggagc catagaagct tctaagcaga
1741 agagggactt gccctaattc aggtgatcac aggtgtcttg tggcctccat gggaggttga
1801 aaaccagaga aggtgaaggg ggggctgcac tgagccacag gaacaatgat ggagattcca
1861 gctaagccca gaccccgtgg attctagata gattttagag gcagcagaca gaattactga
1921 ggaattgagt gtaagagtgg aataaagtta tcaaggacaa tgccaagggt ggggcacccc
1981 caaatttgac tctgggagac tcagccaaat cctatctggt aataaaattt cttttttatt
2041 tttcaaaaaa aaaaaaaaaa aaaagaaaaa aaaaaaaaaa a
//