LOCUS BC067768 1411 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens geranylgeranyl diphosphate synthase 1, mRNA (cDNA
clone MGC:87077 IMAGE:5295932), complete cds.
ACCESSION BC067768
VERSION BC067768.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1411)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1411)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: c Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21359876.
FEATURES Location/Qualifiers
source 1..1411
/db_xref="H-InvDB:HIT000262736"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87077 IMAGE:5295932"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1411
/gene="GGPS1"
/gene_synonym="GGPPS"
/gene_synonym="GGPPS1"
/db_xref="GeneID:9453"
/db_xref="MIM:606982"
CDS 173..1075
/gene="GGPS1"
/gene_synonym="GGPPS"
/gene_synonym="GGPPS1"
/codon_start=1
/product="GGPS1 protein"
/protein_id="AAH67768.1"
/db_xref="GeneID:9453"
/db_xref="MIM:606982"
/translation="MEKTQETVQRILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPED
KLQIIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEK
VLTLDHQDAVKLFTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAV
GLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTI
HAIWSRPESTQVQNILRQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQID
ARGGNPELVALVKHLSKMFKEENE"
BASE COUNT 450 a 289 c 293 g 379 t
ORIGIN
1 aggtcggccg ggggccaccg aggggccagg agggcctgtg ggccgcgggc aggaccggcc
61 cgccacagag cccctgccca cgtcccgttc cgggctcaga cccgacaagt gggagcgaga
121 tcaacatctg gccccgccgc ggggacaaca ttagctttga agtttaaatc caatggagaa
181 gactcaagaa acagtccaaa gaattcttct agaaccctat aaatacttac ttcagttacc
241 aggtaaacaa gtgagaacca aactttcaca ggcatttaat cattggctga aagttccaga
301 ggacaagcta cagattatta ttgaagtgac agaaatgttg cataatgcca gtttactcat
361 cgatgatatt gaagacaact caaaactccg acgtggcttt ccagtggccc acagcatcta
421 tggaatccca tctgtcatca attctgccaa ttacgtgtat ttccttggct tggagaaagt
481 cttaaccctt gatcaccaag atgcagtgaa gctttttacc cgccagcttt tggaactcca
541 tcagggacaa ggcctagata tttactggag ggataattac acttgtccca ctgaagaaga
601 atataaagct atggtgctgc agaaaacagg tggactgttt ggattagcag taggtctcat
661 gcagttgttc tctgattaca aagaagattt aaaaccgcta cttaatacac ttgggctctt
721 tttccaaatt agggatgatt atgctaatct acactccaaa gaatatagtg aaaacaaaag
781 tttttgtgaa gatctgacag agggaaagtt ctcatttcct actattcatg ctatttggtc
841 aaggcctgaa agcacccagg tgcagaatat cttgcgccag agaacagaaa acatagatat
901 aaaaaaatac tgtgtacatt atcttgagga tgtaggttct tttgaataca ctcgtaatac
961 ccttaaagag cttgaagcta aagcctataa acagattgat gcacgtggtg ggaaccctga
1021 gctagtagcc ttagtaaaac acttaagtaa gatgttcaaa gaagaaaatg aataatgtta
1081 agccattctt gattggacct catagcttat tttagttaat cttttttttg tcttttagcc
1141 ttaccacctt ttaaaaaatt tgttattctc cagaaacagt aaataggtga gtaggggtgg
1201 tgcaagtgaa ttcgttttca tttagaagcc cctctgtaca gataatcaaa attcaaagtt
1261 gaaagaatca aaagcagcca cagttatgta ggtctgattt gaatgtcata attgcagtga
1321 caggacattg ccaccaactc tatcctacta ccatcaatgt tgtgtttatt ccgtcaataa
1381 aaaagacttg cttccaaaaa aaaaaaaaaa a
//