LOCUS BC067756 1296 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens sperm associated antigen 16, mRNA (cDNA clone
IMAGE:5301105), complete cds.
ACCESSION BC067756
VERSION BC067756.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1296)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1296)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: g Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 70887779
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1296
/db_xref="H-InvDB:HIT000262724"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5301105"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1296
/gene="SPAG16"
/gene_synonym="DKFZp666P1710"
/gene_synonym="FLJ22724"
/gene_synonym="PF20"
/gene_synonym="WDR29"
/db_xref="GeneID:79582"
/db_xref="HGNC:HGNC:23225"
CDS 93..644
/gene="SPAG16"
/gene_synonym="DKFZp666P1710"
/gene_synonym="FLJ22724"
/gene_synonym="PF20"
/gene_synonym="WDR29"
/codon_start=1
/product="sperm associated antigen 16"
/protein_id="AAH67756.1"
/db_xref="GeneID:79582"
/db_xref="HGNC:HGNC:23225"
/translation="MAAQRGMPSSAVRVLEEALGMGLTAAGDARDTADAVAAEGAYYL
EQVTITEASEDDYEYEEIPDDNFSIPEGEEDLAKAIQMAQEQATDTEILERKTVLPSK
HAVPEVIEDFLCNFLIKMGMTRTLDCFQSEWYELIQKGVTELRTVGNVPDVYTQIMLL
ENENKNLKKDLKHYKQAAEYVIF"
BASE COUNT 429 a 199 c 309 g 359 t
ORIGIN
1 gagagctccc gggggccgtt gggtagcgtc ttcgctgttg cccttaggga cggctgtggg
61 cctgctgggg gtgggggccc gaagcgccag agatggctgc tcagcgaggg atgcccagct
121 ccgccgtgag ggtcctggaa gaggcgttgg gcatgggttt gacggcagcc ggggacgcga
181 gggacacggc ggacgcggtg gcggctgagg gcgcctacta cctggaacag gtcaccataa
241 ctgaagcatc tgaagatgac tatgaatatg aagagatacc agatgacaat tttagcatcc
301 cagaaggtga agaagatctg gcaaaagcaa ttcagatggc ccaagaacag gctacagata
361 ctgaaatttt ggaacggaaa acagttcttc cttcaaagca tgcagtacct gaagtaatag
421 aagactttct ctgcaatttc ttgatcaaaa tgggaatgac cagaactctt gattgctttc
481 agtctgaatg gtatgagtta atacagaaag gagtgactga acttagaact gttgggaatg
541 ttccagatgt ctacacccag attatgcttt tggaaaatga gaacaaaaat ttaaagaaag
601 atttgaagca ctacaaacaa gcagctgagt atgttatttt ttaaatgaca ttttcttctt
661 tttcttttgg actaaataaa agagttgagt gaagctgata tatgtaatat accagagcct
721 taatttttga aaactgaatt tttctagttg taaagaatgt gagaggcttc attagcaaat
781 taattaaaca gatgatcaga actatcacaa ttataactta ccaacaagaa gggaatgcag
841 gtagttgttt aggagatggt acatttttta tataacattc acttccttgt gtatttgata
901 gtcttttcat ggtttataac attttctcct gtaaagatag gctaatttct gaaataataa
961 ttaaatttat agaaagccga gaggaaattg ctagtttatt cctggtagag gaatttctgt
1021 atttgaaaat tctccagaag gaataatata aactgtggac tttgggtgat aatgatatgt
1081 aggttcgtca gttgttaaca aatgtatccc tctgttgggg gctattgata atggggaagg
1141 ctgtgcatgt gtgggagtag gaggtgtatg ggacatctct gtaccttcta atcaattttg
1201 ctatgaactt aaaactgctc taaaaataaa gtttattaaa aaaaagttaa aaaaaaaaaa
1261 aaaaaaaaaa aaaaaaaaaa agaaaaaaaa aaaaaa
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