LOCUS BC067742 1774 bp mRNA linear HUM 28-JUL-2005 DEFINITION Homo sapiens putative homeodomain transcription factor 2, mRNA (cDNA clone IMAGE:5314245), complete cds. ACCESSION BC067742 VERSION BC067742.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1774) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1774) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-MAR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 168 Row: h Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40254932 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1774 /db_xref="H-InvDB:HIT000262710" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5314245" /tissue_type="Brain, hypothalamus" /clone_lib="NIH_MGC_96" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1774 /gene="PHTF2" /gene_synonym="DKFZP564F013" /db_xref="GeneID:57157" CDS 120..1178 /gene="PHTF2" /gene_synonym="DKFZP564F013" /codon_start=1 /product="PHTF2 protein" /protein_id="AAH67742.1" /db_xref="GeneID:57157" /translation="MASKVTDAIVWYQKKIGAYDQQIWEKSVEQREIKGLRNKPKKTA HVKPDLIDVDLVRGSAFAKAKPESPWTSLTRKGIVRVVFFPFFFRWWLQVTSKVIFFW LLVLYLLQVAAIVLFCSTSSPHSIPLTEVIGPIWLMLLLGTVHCQIVSTRTPKPPLST GGKRRRKLRKAAHLEVHREGDGSSTTDNTQEGAVQNHGTSTSHSVGTVFRDLWHAAFF LSGSKKAKNSIDKSTETDNGYVSLDGKKTVKSGEDGIQNHEPQCETIRPEETAWNTGT LRNGPSKDTQRTITNVSDEVSSEEGPETGYSLRRHVDRTSEGVLRNRKSHHYKKHYPN EVYTLSLSVYIHIYFICY" BASE COUNT 571 a 335 c 333 g 535 t ORIGIN 1 gggctctgtt ggcggcggcg ctagcttcgg agtctcccgc gcgcacctca gccgcctcct 61 agcggcgcgg cgctcgctcc tacgcctaaa atgaccaatg tgtgatttca gtggaataaa 121 tggcgtccaa agtcacagat gctatagtct ggtatcaaaa gaagattgga gcatatgatc 181 aacaaatatg ggaaaaatct gttgaacaga gagaaatcaa ggggctaagg aataaaccaa 241 agaaaacagc acatgtgaaa ccagacctca tagatgttga tcttgtaaga gggtctgcat 301 ttgcaaaggc aaagcctgaa agtccttgga cttctctgac cagaaaggga attgttcgag 361 ttgtattttt cccctttttc ttccggtggt ggttacaagt aacatcaaag gtcatctttt 421 tctggcttct tgtcctttat cttcttcaag ttgctgcaat agtattattc tgctccactt 481 ctagcccaca cagcatacct ctgacagagg tgattgggcc gatatggctg atgctgctcc 541 tgggaactgt gcattgccag attgtttcca caagaacacc caaacctcct ctaagtacag 601 ggggtaaaag aagaaggaaa ttaagaaaag cagcccattt ggaagtacat agggaaggag 661 atggttctag taccacagat aacacacaag agggagcagt tcagaaccac ggtacaagca 721 cctctcacag cgttggcact gtcttcagag atctctggca tgctgctttc tttttatcag 781 gatcaaagaa agcaaagaat tcaattgata aatcaactga aactgacaat ggctatgtat 841 cccttgatgg gaagaagact gttaaaagcg gtgaagatgg aatacaaaac catgaacctc 901 agtgtgaaac tattcgacca gaagagacag cctggaacac aggaacactg aggaatggtc 961 ctagcaaaga tacccaaagg acaataacaa atgtctctga tgaagtctcc agtgaggaag 1021 gtcctgaaac aggatactca ttacgtcgtc atgtggacag gacttctgaa ggtgttcttc 1081 ggaatagaaa gtcacaccat tataagaaac attaccctaa tgaggtatat actttgtcct 1141 taagtgtata catacatatc tattttatat gttactaatt tataacttct ttcaacaatt 1201 aaaaattgtt gaaataaata tttcacatta ttgtcaatat ttattattgt tgtatgatct 1261 ggatttataa aatagcagtt ttaggtttac gtattgcaca tgtattgata gatagccaca 1321 catttgagct cattttatgc attatctttg aagactcata cattgtttgt tgtttgcttt 1381 taaagaagaa cattctggag agagaatctg caaactcctg tgttcacttt ttccacaatt 1441 tgaaaggctt tatacatttg atcatagcaa agttatttta agtaacttcc ttcatattgc 1501 tgtcaccagt tattaagtcc ccatacttca aaattcagtt cttttttctt tgtttctatt 1561 tttccttatt aatctttatt ttctctaaac ccttttcaac tatatcatat ctcttgagct 1621 tcaaattgtt taaataaaga atttcattca attgtatttt cagtttctaa tctaagggta 1681 gaacatttgg ctttaaggca aataaattac actgtttatc acttttttat aaacattaaa 1741 aaaaaaaaaa aaaaaaacaa aaaaaaaaaa aaaa //