LOCUS BC067234 1413 bp mRNA linear HUM 08-DEC-2006
DEFINITION Homo sapiens bromodomain PHD finger transcription factor, mRNA
(cDNA clone IMAGE:4557629), partial cds.
ACCESSION BC067234
VERSION BC067234.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1413)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1413)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: g Column: 11.
FEATURES Location/Qualifiers
source 1..1413
/db_xref="H-InvDB:HIT000262485"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4557629"
/tissue_type="Kidney"
/clone_lib="NIH_MGC_75"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..1413
/gene="BPTF"
/gene_synonym="FAC1"
/gene_synonym="NURF301"
/db_xref="GeneID:2186"
/db_xref="HGNC:HGNC:3581"
/db_xref="MIM:601819"
CDS <1..516
/gene="BPTF"
/gene_synonym="FAC1"
/gene_synonym="NURF301"
/codon_start=1
/product="BPTF protein"
/protein_id="AAH67234.1"
/db_xref="GeneID:2186"
/db_xref="HGNC:HGNC:3581"
/db_xref="MIM:601819"
/translation="GDESQFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTE
DAMTVLTPLTEKDYEGLKRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMDLATM
EERVQRRYYEKLTEFVADMTKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGFKASR
SHNNKLQSTAS"
BASE COUNT 468 a 251 c 278 g 416 t
ORIGIN
1 ggggatgagt cacaatttta tattggctgt gatcggtgtc agaattggta ccatgggcgc
61 tgcgttggca tcttgcaaag tgaggcagag ctcattgatg agtatgtctg tccacagtgc
121 cagtcaacag aggatgccat gacagtgctc acgccactaa cagagaagga ttatgagggg
181 ttgaagaggg tgctccgttc cttacaggcc cataagatgg cctggccttt ccttgaacca
241 gtagacccta atgatgcacc agattattat ggtgttatta aggaacctat ggaccttgcc
301 accatggaag aaagagtaca aagacgatat tatgaaaagc tgacggaatt tgtggcagat
361 atgaccaaaa tttttgataa ctgtcgttac tacaatccaa gtgactcccc attttaccag
421 tgtgcagaag ttctcgaatc attctttgta cagaaattga aaggcttcaa agctagcagg
481 tctcataaca acaaactgca gtctacagct tcttaaagtt cagcgtgtta acctaacata
541 aaacacagca agaatctggt tgtctgaact attttaaatt aaggagccag atgtttttag
601 tcaggctatc ctgacaagac ttgacctaaa cttcgttttt attggtcata acagtccaat
661 tatattcttg gccaattttg tccaacggac aagaaaaaag caaagtcaac gacaccatta
721 tcttgtcaag atcagatggt tttactattg tggcagaagc gagaaaactt tgtttattga
781 aaaaaaaaga aaaagaaagc aagaaaaaaa gatactatgg ggtcaagtgt aactccatgg
841 aaatgccacg tctgctcttc agtgaagaag ctggtttaga gtctcacaga aaacttttga
901 ctgtatttat ttattgttgc aaaaaagacg cttttttatt gctgccctca tttgtcagct
961 aagtattttt tcttataaaa tccagccccg gttacatata atcatctgta tcttatcatg
1021 attcctgtag gtaaaagtac aagacgacct ctagatgtct tttctttcta tgaaaggagc
1081 tgctatgtac acatgtgcac acacacacaa ctgggaatca acaatgagtt tattgttcat
1141 ggtagattaa aattaagctt gcataaaggt tgggctaagt ggtcctggac tacagactct
1201 gttgccttga atataacagt acaatttgtc aattactctg caccaggcta aagtgagtaa
1261 aatctatttg aaggtatctt gtttgtaaac atttgtcaga ttctaatttt tttcttttgt
1321 attaaaattc aactatggat gtatatgaaa caaaataaat ggagataatt tttctcccac
1381 aagaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//