LOCUS BC067128 4374 bp mRNA linear HUM 24-JUL-2006
DEFINITION Homo sapiens hairless homolog (mouse), mRNA (cDNA clone MGC:70516
IMAGE:6138631), complete cds.
ACCESSION BC067128
VERSION BC067128.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4374)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4374)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: h Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 70906481.
FEATURES Location/Qualifiers
source 1..4374
/db_xref="H-InvDB:HIT000262461"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:70516 IMAGE:6138631"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4374
/gene="HR"
/gene_synonym="AU"
/gene_synonym="HSA277165"
/db_xref="GeneID:55806"
/db_xref="HGNC:HGNC:5172"
/db_xref="MIM:602302"
CDS 131..3700
/gene="HR"
/gene_synonym="AU"
/gene_synonym="HSA277165"
/codon_start=1
/product="hairless homolog (mouse)"
/protein_id="AAH67128.1"
/db_xref="GeneID:55806"
/db_xref="HGNC:HGNC:5172"
/db_xref="MIM:602302"
/translation="MESTPSFLKGTPTWEKTAPENGIVRQEPGSPPRDGLHHGPLCLG
EPAPFWRGVLSTPDSWLPPGFPQGPKDMLPLVEGEGPQNGERKVNWLGSKEGLRWKEA
MLTHPLAFCGPACPPRCGPLMPEHSGGHLKSDPVAFRPWHCPFLLETKILERAPFWVP
TCLPPYLVSGLPPEHPCDWPLTPHPWVYSGGQPKVPSAFSLGSKGFYYKDPSIPRLAK
EPLAAAEPGLFGLNSGGHLQRAGEAERPSLHQRDGEMGAGRQQNPCPLFLGQPDTVPW
TSWPACPPGLVHTLGNVWAGPGDGNLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPTK
GGGLGPCGKCQEGLEGGASGASEPSEEVNKASGPRACPPSHHTKLKKTWLTRHSEQFE
CPRGCPEVEERPVARLRALKRAGSPEVQGAMGSPAPKRPPDPFPGTAEQGAGGWQEVR
DTSIGNKDVDSGQHDEQKGPQDGQASLQDPGLQDIPCLALPAKLAQCQSCAQAAGEGG
GHACHSQQVRRSPLGGELQQEEDTATNSSSEEGPGSGPDSRLSTGLAKHLLSGLGDRL
CRLLRREREALAWAQREGQGPAVTEDSPGIPRCCSRCHHGLFNTHWRCPRCSHRLCVA
CGRVAGTGRAREKAGFQEQSAEECTQEAGHAACSLMLTQFVSSQALAELSTAMHQVWV
KFDIRGHCPCQADARVWAPGDAGQQKESTQKTPPTPQPSCNGDTHRTKSIKEETPDSA
ETPAEDRAGRGPLPCPSLCELLASTAVKLCLGHERIHMAFAPVTPALPSDDRITNILD
SIIAQVVERKIQEKALGPGLRAGPGLRKGLGLPLSPVRPRLPPPGALLWLQEPQPCPR
RGFHLFQEHWRQGQPVLVSGIQRTLQGNLWGTEALGALGGQVQALSPLGPPQPSSLGS
TTFWEGFSWPELRPKSDEGSVLLLHRALGDEDTSRVENLAASLPLPEYCALHGKLNLA
SYLPPGLALRPLEPQLWAAYGVSPHRGHLGTKNLCVEVADLVSILVHADTPLPAWHRA
QKDFLSGLDGEGLWSPGSQVSTVWHVFRAQDAQRIRRFLQMVCPAGAGALEPGAPGSC
YLDAGLRRRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTVSVTQHFLSPETS
ALSAQLCHQGPSLPPDCHLLYAQMDWAVFQAVKVAVGTLQEAK"
BASE COUNT 840 a 1439 c 1363 g 732 t
ORIGIN
1 ggccccggag ctggcccatg gggagcaggc gcccggtgcc ggccacgacg accgccaccg
61 cccgcgccgc gaccggccgg tgaagcccag ggacccccct ctcggagagc cccatgaggg
121 caggagagtg atggagagta cgcccagctt cctgaagggc accccaacct gggagaagac
181 ggccccagag aacggcatcg tgagacagga gcccggcagc ccgcctcgag atggactgca
241 ccatgggccg ctgtgcctgg gagagcctgc tcccttttgg aggggcgtcc tgagcacccc
301 agactcctgg cttccccctg gcttccccca gggccccaag gacatgctcc cacttgtgga
361 gggcgagggc ccccagaatg gggagaggaa ggtcaactgg ctgggcagca aagagggact
421 gcgctggaag gaggccatgc ttacccatcc gctggcattc tgcgggccag cgtgcccacc
481 tcgctgtggc cccctgatgc ctgagcatag tggtggccat ctcaagagtg accctgtggc
541 cttccggccc tggcactgcc ctttccttct ggagaccaag atcctggagc gagctccctt
601 ctgggtgccc acctgcttgc caccctacct agtgtctggc ctgcccccag agcatccatg
661 tgactggccc ctgaccccgc acccctgggt atactccggg ggccagccca aagtgccctc
721 tgccttcagc ttaggcagca agggctttta ctacaaggat ccgagcattc ccaggttggc
781 aaaggagccc ttggcagctg cggaacctgg gttgtttggc ttaaactctg gtgggcacct
841 gcagagagcc ggggaggccg aacgcccttc actgcaccag agggatggag agatgggagc
901 tggccggcag cagaatcctt gcccgctctt cctggggcag ccagacactg tgccctggac
961 ctcctggccc gcttgtcccc caggccttgt tcatactctt ggcaacgtct gggctgggcc
1021 aggcgatggg aaccttgggt accagctggg gccaccagca acaccaaggt gcccctctcc
1081 tgagccgcct gtcacccagc ggggctgctg ttcatcctac ccacccacta aaggtggggg
1141 tcttggccct tgtgggaagt gccaggaggg cctggagggg ggtgccagtg gagccagcga
1201 acccagcgag gaagtgaaca aggcctctgg ccccagggcc tgtcccccca gccaccacac
1261 caagctgaag aagacatggc tcacacggca ctcggagcag tttgaatgtc cacgcggctg
1321 ccctgaggtc gaggagaggc cggttgctcg gctccgggcc ctcaaaaggg caggcagccc
1381 cgaggtccag ggagcaatgg gcagtccagc ccccaagcgg ccaccggacc ctttcccagg
1441 cactgcagaa cagggggctg ggggttggca ggaggtgcgg gacacatcga tagggaacaa
1501 ggatgtggac tcgggacagc atgatgagca gaaaggaccc caagatggcc aggccagtct
1561 ccaggacccg ggacttcagg acataccatg cctggctctc cctgcaaaac tggctcaatg
1621 ccaaagttgt gcccaggcag ctggagaggg aggagggcac gcctgccact ctcagcaagt
1681 gcggagatcg cctctgggag gggagctgca gcaggaggaa gacacagcca ccaactccag
1741 ctctgaggaa ggcccagggt ccggccctga cagccggctc agcacaggcc tcgccaagca
1801 cctgctcagt ggtttggggg accgactgtg ccgcctgctg cggagggagc gggaggccct
1861 ggcttgggcc cagcgggaag gccaagggcc agccgtgaca gaggacagcc caggcattcc
1921 acgctgctgc agccgttgcc accatggact cttcaacacc cactggcgat gtccccgctg
1981 cagccaccgg ctgtgtgtgg cctgtggtcg tgtggcaggc actgggcggg ccagggagaa
2041 agcaggcttt caggagcagt ccgcggagga gtgcacgcag gaggccgggc acgctgcctg
2101 ttccctgatg ctgacccagt ttgtctccag ccaggctttg gcagagctga gcactgcaat
2161 gcaccaggtc tgggtcaagt ttgatatccg ggggcactgc ccctgccaag ctgatgcccg
2221 ggtatgggcc cccggggatg caggccagca gaaggaatca acacagaaaa cgcccccaac
2281 tccacaacct tcctgcaatg gcgacaccca caggaccaag agcatcaaag aggagacccc
2341 cgattccgct gagaccccag cagaggaccg tgctggccga gggcccctgc cttgtccttc
2401 tctctgcgaa ctgctggctt ctaccgcggt caaactctgc ttgggccatg agcgaataca
2461 catggccttc gcccccgtca ctccggccct gcccagtgat gaccgcatca ccaacatcct
2521 ggacagcatt atcgcacagg tggtggaacg gaagatccag gagaaagccc tggggccggg
2581 gcttcgagct ggcccgggtc tgcgcaaggg cctgggcctg cccctctctc cagtgcggcc
2641 ccggctgcct cccccagggg ctttgctgtg gctgcaggag ccccagcctt gccctcggcg
2701 tggcttccac ctcttccagg agcactggag gcagggccag cctgtgttgg tgtcagggat
2761 ccaaaggaca ttgcagggca acctgtgggg gacagaagct cttggggcac ttggaggcca
2821 ggtgcaggcg ctgagccccc tcggacctcc ccagcccagc agcctgggca gcacaacatt
2881 ctgggagggc ttctcctggc ctgagcttcg cccaaagtca gacgagggct ctgtcctcct
2941 gctgcaccga gctttggggg atgaggacac cagcagggtg gagaacctag ctgccagtct
3001 gccacttccg gagtactgcg ccctccatgg aaaactcaac ctggcttcct acctcccacc
3061 gggccttgcc ctgcgtccac tggagcccca gctctgggca gcctatggtg tgagcccgca
3121 ccggggacac ctggggacca agaacctctg tgtggaggtg gccgacctgg tcagcatcct
3181 ggtgcatgcc gacacaccac tgcctgcctg gcaccgggca cagaaagact tcctttcagg
3241 cctggacggg gaggggctct ggtctccggg cagccaggtc agcactgtgt ggcacgtgtt
3301 ccgggcacag gacgcccagc gcatccgccg ctttctccag atggtgtgcc cggccggggc
3361 aggcgccctg gagcctggcg ccccaggcag ctgctacctg gatgcagggc tgcggcggcg
3421 cctgcgggag gagtggggcg tgagctgctg gaccctgctc caggcccccg gagaggccgt
3481 gctggtgcct gcaggggctc cccaccaggt gcagggcctg gtgagcacag tcagcgtcac
3541 tcagcacttc ctctcccctg agacctctgc cctctctgct cagctctgcc accagggacc
3601 cagccttccc cctgactgcc acctgcttta tgcccagatg gactgggctg tgttccaagc
3661 agtgaaggtg gccgtgggga cattacagga ggccaaatag agggatgcta ggtgtctggg
3721 atcggggtgg ggacaggtag accaggtgct cagcccaggc acaacttcag caggggatgg
3781 cgctagggga cttggggatt tctggtcaac cccacaagca ccactctggg cacaagcagg
3841 gcactctgtt cccctccccc ttaagccaac aaccacagtg ccaccaagct cacacctgtc
3901 cttctcaggc tggcatctcc cccaccctgt gccccttttc atggtaccag gcccgcactg
3961 ggggcaattg acttcctcca atccccactc ctccgagacc caggagacaa acagcccttc
4021 cttggggaaa cttgggaatc attctggctt aaacaacacc tcctcctgct gctcactccc
4081 gctgagccca ctctactgcc ccagctccgt ttctaccacc gcatcctcac tgggctcact
4141 gcaggcatgc tgaacaaggg gcctccaacc ttctgccctc ctgccaaaag atctggggag
4201 tgtgaggaga gggtggcatc aggagctgct caggcttggc ggagggagcg gcatgggcga
4261 tgtcactcag ccccttcccg gtccgcccgc ttccctcctt catgatttcc attaaagtct
4321 gttgttttgt gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//