LOCUS BC067117 2635 bp mRNA linear HUM 10-MAY-2004
DEFINITION Homo sapiens SH2 domain containing 4A, mRNA (cDNA clone
IMAGE:5533506), partial cds.
ACCESSION BC067117
VERSION BC067117.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2635)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2635)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (08-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: a Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361890.
FEATURES Location/Qualifiers
source 1..2635
/db_xref="H-InvDB:HIT000262451"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5533506"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2635
/gene="SH2D4A"
/gene_synonym="FLJ20967"
/gene_synonym="SH2A"
/db_xref="GeneID:63898"
CDS <1..1144
/gene="SH2D4A"
/gene_synonym="FLJ20967"
/gene_synonym="SH2A"
/codon_start=2
/product="SH2D4A protein"
/protein_id="AAH67117.1"
/db_xref="GeneID:63898"
/translation="EPRKTHSEEFTNSLKTKSQYHDLQAPDNQQTKDIWKKVAEKEEL
EQGSRPAPTLEEEKIRSLSSSSRNIQQMLADSINRMKAYAFHQKKESMKKKQDEEINQ
IEEERTKQICKSWKEDSEWQASLRKSKAADEKRRSLAKQAREDYKRLSLGAQKGRGGE
RLQNPLRVPQKPERPPLPPKPQFLNSGAYPQKPLRNQGVVRTLSSSAQEDIIRWFKEE
QLPLRAGYQKTSDTIAPWFHGILTLKKANELLLSTGMPGSFLIRVSERIKGYALSYLS
EDGCNISSSMPLQTPTASWAWTSYSMPPWRIWWNITRRNPSLPWGRSSFSIPVVSRTS
CLTTWSCLSDSLHQGHPTASKRAFPWTNATATFMCEAKITLQQSQY"
BASE COUNT 834 a 594 c 616 g 591 t
ORIGIN
1 agagcccaga aaaactcact ctgaagaatt caccaatagc ttgaaaacaa aatcacagta
61 ccatgatctg caggctccgg ataaccagca gactaaagac atctggaaga aagtggcaga
121 aaaggaggaa ctggagcaag gatctaggcc agcaccaacc ctggaagaag agaaaatccg
181 atcactctcc agttcttcaa gaaatattca acaaatgttg gcagattcaa tcaatcgtat
241 gaaggcatat gcatttcacc agaagaaaga atctatgaag aaaaaacaag atgaagaaat
301 aaatcaaata gaagaagaga gaacgaagca gatttgtaag agctggaaag aagactcgga
361 atggcaggca tctctgcgaa aatccaaagc agctgatgag aagagacgct ccttggctaa
421 acaagcacga gaagactaca agaggttatc cctcggggcc cagaaaggaa gaggcggtga
481 gaggctgcaa aaccccttgc gtgttccgca gaaaccagaa agacctcccc ttccacccaa
541 gcctcagttc ctaaactcag gggcatatcc tcaaaaacct cttagaaatc agggagtggt
601 gaggacactg tccagctctg cccaagagga catcatccgg tggtttaaag aggagcagct
661 accacttcga gcgggctacc agaaaacctc agacaccata gccccctggt tccatggaat
721 tctcacactc aagaaagcaa atgaacttct tctgagcaca ggcatgcccg gcagttttct
781 catccgagtc agtgaaagga tcaaaggcta tgccctgtcc tatctgtcgg aggacggctg
841 taacatttcc tcatcgatgc ctctgcagac gcctacagct tcctgggcgt ggaccagcta
901 cagcatgcca ccttggcgga tttggtggaa tatcacaagg aggaacccat cacttccctg
961 gggaaggagc tccttctcta tccctgtggt cagcaggacc agctgcctga ctacctggag
1021 ctgtttgagt gacagcctcc atcagggtca tcctacagcc tccaagcggg ctttcccctg
1081 gacaaatgcc actgcaacat ttatgtgtga agccaaaatc accctgcagc agagccaata
1141 ctgatcaact gaaagtaaag tatccatgga gtcctcattg acacctcttt tctgcacaaa
1201 tactggaatt caatgtcaag agaaaatgac ctctgctcaa aagggagaag agtctcaatt
1261 tcagcaagta cctgtcatga agggtatgac cttaatgatg tacataaaat aaaacaaatg
1321 aagaaatgga aaacttttag aaattaaggt gtacttgaaa acgaatatct atcatatgac
1381 ccctgcactc cctctgtatc atctcaggag gtttcagggg cctgttgaca tgaagtttcg
1441 aagtttcatg ttggctttgg aatggtagca aaagcctttc ctggctgaga tgatgcttaa
1501 aacacacctc acttattgta catgttggaa ccaggacatg agagacatag aaaaacagaa
1561 gtcatgaatg taaattgaat gagaggctta acatgcatga aaatacagat ggacctgcag
1621 gaaagtgagc aaacatcgct gagtttgttt tcttgttcgg gagaatgggg ccggggctgg
1681 cctggcctcc cctggatata ctctatagtg caccaaaagg ataaagcatc tgtacatgta
1741 tttttttatt ttttatcaga agtgcttaga caagaacaga ataagcaggc tgtttggatg
1801 ctacttgtgg ttgaattgtg ttcccccaaa atatatggtg aagtcttaac ccccatcccc
1861 gtgaatggga ccttgtttgg aaatagggtc tttgcagata tagtcaagat gaggtcacat
1921 tggattaggg tgggccccaa atccaatgac tggcatcctt aggagaagag agagttttgg
1981 taatagacac aaatgcagtg ggaagaagac caggggacaa gaggcaagtt ggagtgatgc
2041 agccggaagg gaagggacac caaggatctc cggccaccag cagaagccag cagagaggca
2101 tgggacaggt tccccacaag ccttagaagg aagcatggcc ctgacttcag aattccagac
2161 tccagaactg gaagaataaa tgtctgttgt tttaagctgc ttagttcatg ctgagttcat
2221 gctgacttgt tactatagcc ccagaaagct aatacagtcg tttatgtaat tacataacct
2281 gacacacaag atcgacccat tcactgctgc ccagtccacc attttcataa tgaagtagaa
2341 atgggaggta agaaaaacat tccagccagt tctgtttagc cctgggacac atatttgtcc
2401 cgtcaggaat cttatgccct cctggaaccc ccgcccacct cagtccagtc ccagtcaggc
2461 gaacggcctc tggacaggga ctgaggtggc tctgagccac tggagatcat ttttcttgga
2521 ggatggagat tggctagtac ctctggccta actgtgtagg tcaatactct tttacattgc
2581 cttctaataa aagcagaatg atacagcaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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