LOCUS BC067094 1744 bp mRNA linear HUM 30-MAR-2004
DEFINITION Homo sapiens WD repeat domain 13, mRNA (cDNA clone IMAGE:6082538),
partial cds.
ACCESSION BC067094
VERSION BC067094.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1744)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1744)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (08-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: k Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1744
/db_xref="H-InvDB:HIT000262429"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6082538"
/tissue_type="Pancreas, ductal carcinoma"
/clone_lib="NIH_MGC_110"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1744
/gene="WDR13"
/gene_synonym="FLJ20563"
/db_xref="GeneID:64743"
CDS <1..1610
/gene="WDR13"
/gene_synonym="FLJ20563"
/codon_start=3
/product="WDR13 protein"
/protein_id="AAH67094.1"
/db_xref="GeneID:64743"
/translation="DDHGNTRVGVRDISGAEGLDVYGNGRLVEGTELDPFARDAHIPG
PCPAGCRGRTRQRRRPGNGRGVAASLSSGREFRTQYIRRRSQLLRENAKAGHPPALRR
QYLRLRGQLLGQRYGPLSEPGSARAYSNSIVRSSRTTLDRMEDFEDDPRALGARGHRR
SVSRGSYQLQAQMNRAVYEDRPPGSVVPTSAAEASRAMAGDTSLSENYAFAGMYHVFD
QHVDEAVPRVRFANDDRHRLACCSLDGSISLCQLVPAPPTVLRVLRGHTRGVSDFAWS
LSNDILVSTSLDATMRIWASEDGRCIREIPDPDSAELLCCTFQPVNNNLTVVGNAKHN
VHVMNISTGKKVKGGSSKLTGRVLALSFDAPGRLLWAGDDRGSVFSFLFDMATGKLTK
AKRLVVHEGSPVTSISARSWVSREARDPSLLINACLNKLLLYRVVDNEGTLQLKRSFP
IEQSSHPVRSIFCPLMSFRQGACVVTGSEDMCVHFFDVERAAKAAVNKLQGHSAPVLD
VSFNCDESLLASSDASGMVIVWRREQK"
misc_feature 639..1595
/gene="WDR13"
/gene_synonym="FLJ20563"
/note="WD40; Region: WD40 domain, found in a number of
eukaryotic proteins that cover a wide variety of functions
including adaptor/regulatory modules in signal
transduction, pre-mRNA processing and cytoskeleton
assembly"
/db_xref="CDD:cd00200"
BASE COUNT 353 a 525 c 528 g 338 t
ORIGIN
1 gtgatgacca tggtaacacc cgggtgggag ttcgtgacat ctccggcgcg gagggactcg
61 atgtctatgg caatggtcgc ctggtggaag ggacggaact agatcccttc gctcgggacg
121 ctcacattcc aggcccttgt cctgcaggct gccgcgggcg gacacgccag aggaggaggc
181 cggggaatgg ccgcggtgtg gcagcaagtc ttagcagtgg acgcgagttt cggacgcagt
241 atatccgccg gcgcagccag ctgctgcggg agaatgccaa ggctgggcac cccccagcgc
301 tgcgtcggca gtacctgagg cttcgggggc agctgctggg ccagcgctac gggcccctct
361 ccgagccagg cagtgctcgt gcctatagca acagcatcgt ccgcagtagc cgcactactc
421 ttgaccgcat ggaggacttt gaggatgatc ctcgggccct gggggcccgt gggcaccgtc
481 gttctgtcag cagaggctcc taccagctgc aggcgcagat gaaccgtgcc gtctatgagg
541 acaggccccc tggcagcgtg gtgcccacgt cagcagcaga ggcaagtcgg gccatggccg
601 gggacacgtc actgagcgag aactatgcct ttgcgggcat gtatcatgtt tttgaccagc
661 acgtggatga ggcagtccca agggtgcgct tcgccaatga tgaccgacac cgcctggcct
721 gctgctcact cgacggcagc atctccctgt gccagctggt gcctgcccca cccacagtgc
781 ttcgcgtgct acggggccac acccgtggtg tctccgactt cgcctggtcc ctctccaatg
841 acatcctcgt gtccacctca ctggatgcca ccatgcgcat ctgggcctct gaggatggtc
901 gctgcatccg agagatccct gaccccgata gcgctgaact gctctgctgc accttccagc
961 ctgtcaacaa caacctcact gtggtgggga acgccaagca caacgtgcat gtcatgaaca
1021 tctccacagg caagaaagtg aaggggggct ccagcaagct gacaggccgt gtccttgctc
1081 tgtcctttga tgcccctggc cggctgctct gggcgggtga tgaccgtggc agtgtcttct
1141 ctttcctctt tgatatggcc acagggaagc tgaccaaagc caagcgtttg gtggtgcatg
1201 aggggagccc tgtgaccagc atctcagccc ggtcctgggt cagccgcgag gcccgggatc
1261 cctcactgct catcaatgct tgcctcaaca agttgctgct ctacagggtg gtagacaacg
1321 aggggaccct gcagctgaag agaagcttcc ccatcgagca gagctcacat cctgtgcgca
1381 gcatcttctg tcccctcatg tccttccgcc agggggcctg cgtggtgacg ggcagtgagg
1441 acatgtgcgt gcacttcttt gatgtggagc gggcggccaa ggctgctgtc aacaagctgc
1501 agggccacag tgcacctgtg cttgatgtca gcttcaactg cgacgagagc ctactggcct
1561 ccagtgacgc cagcggcatg gtcatcgtct ggaggcggga gcagaagtag ggtcctgtcg
1621 gccctgctgc tgtcctccat cccacccctc ttactccagc ctcgtgttgt aaataaagtt
1681 tcggtggtca tgctgaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1741 aaaa
//