LOCUS BC067090 1752 bp mRNA linear HUM 29-AUG-2008
DEFINITION Homo sapiens peroxisomal biogenesis factor 13, mRNA (cDNA clone
MGC:71242 IMAGE:6285875), complete cds.
ACCESSION BC067090
VERSION BC067090.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1752)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1752)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CGAP (Stanford)
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: m Column: 3.
FEATURES Location/Qualifiers
source 1..1752
/db_xref="H-InvDB:HIT000262425"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71242 IMAGE:6285875"
/tissue_type="Liver, hepatocellular carcinoma"
/clone_lib="NIH_MGC_100"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..1752
/gene="PEX13"
/gene_synonym="NALD"
/gene_synonym="ZWS"
/db_xref="GeneID:5194"
/db_xref="HGNC:HGNC:8855"
/db_xref="MIM:601789"
CDS 26..1237
/gene="PEX13"
/gene_synonym="NALD"
/gene_synonym="ZWS"
/codon_start=1
/product="peroxisomal biogenesis factor 13"
/protein_id="AAH67090.1"
/db_xref="GeneID:5194"
/db_xref="HGNC:HGNC:8855"
/db_xref="MIM:601789"
/translation="MASQPPPPPKPWETRRIPGAGPGPGPGPTFQSADLGPTLMTRPG
QPALTRVPPPILPRPSQQTGSSSVNTFRPAYSSFSSGYGAYGNSFYGGYSPYSYGYNG
LGYNRLRVDDLPPSRFVQQAEESSRGAFQSIESIVHAFASVSMMMDATFSAVYNSFRA
VLDVANHFSRLKIHFTKVFSAFALVRTIRYLYRRLQRMLGLRRGSENEDLWAESEGTV
ACLGAEDRAATSAKSWPIFLFFAVILGGPYLIWKLLSTHSDEVTDSINWASGEDDHVV
ARAEYDFAAVSEEEISFRAGDMLNLALKEQQPKVRGWLLASLDGQTTGLIPANYVKIL
GKRKGRKTVESSKVSKQQQSFTNPTLTKGATVADSLDEQEAAFESVFVETNKVPVAPD
SIGKDGEKQDL"
BASE COUNT 518 a 333 c 382 g 519 t
ORIGIN
1 cgggagccga gaggaggcgg aggagatggc gtcccagccg ccacctcccc ccaaaccctg
61 ggagacccgc cgaattccgg gagccggacc gggaccagga ccgggcccca ctttccaatc
121 tgctgatttg ggtcctactt taatgacaag acctggacaa ccagcactta ccagagtgcc
181 cccacctatt cttccaaggc catcacagca gacaggaagt agcagtgtga acacttttag
241 acctgcttac agttcatttt cttctggata tggtgcctat ggaaattcat tttatggagg
301 ctatagtcct tatagttatg gatataatgg gctgggctac aaccgcctcc gtgtagatga
361 tcttccaccc agtagatttg ttcagcaagc tgaagaaagc agcaggggtg catttcagtc
421 cattgaaagt attgtgcatg catttgcctc tgtcagtatg atgatggatg ctaccttttc
481 agctgtctat aacagtttca gggctgtatt ggatgtagca aatcactttt cccgattgaa
541 aatacacttt acaaaagtgt tttcagcttt tgcattggtt aggactatac ggtatcttta
601 cagacggcta cagcggatgt taggtttaag aagaggctct gagaatgaag acctctgggc
661 agagagtgaa ggaactgtgg catgccttgg tgctgaggac cgagcagcta cctcagcaaa
721 atcttggcca atattcttgt tctttgctgt tatccttggt ggtccttacc tcatttggaa
781 actattgtct actcacagtg atgaagtaac agacagcatc aactgggcaa gtggtgagga
841 tgaccatgta gttgccagag cagaatatga ttttgctgcc gtatctgaag aagaaatttc
901 tttccgggct ggtgatatgc tgaacttagc tctcaaagaa caacaaccca aagtgcgtgg
961 ttggcttctg gctagccttg atggccaaac aacaggactt atacctgcga attatgtcaa
1021 aattcttggc aaaagaaaag gtaggaaaac ggtggaatca agtaaagttt ccaagcagca
1081 acaatctttt accaacccaa cactaactaa aggagccacg gttgctgatt ctttggatga
1141 acaggaagct gcctttgaat ctgtttttgt tgaaactaat aaggttccag ttgcacctga
1201 ttccattggg aaagatggag aaaagcaaga tctttgatat ctttcatgtt tgcctgcagt
1261 tgaacaatac tttagagtac tttttaaaat tatttctcac aaagaaatga atgtacaatc
1321 caatgaaaac atttgttatt ggctatttca ggtgttttgc tgctagaaat tattaaagtt
1381 acacactagt atgttggtct ggtgacctgg ttacatttta ttatacacat tattggacca
1441 taaggacatt tgtttcacct agattttaag attatggaga ctgctgtcat ttttatctta
1501 tttaaatctc taggtttatt ggaagagtaa gattgatgaa ctatagcatg cacagtttgg
1561 tacagtagag atcattaata cttttaaaag ttctacatta attgacttgg aatccttagt
1621 aatggagtgg tgacatgtca gtatgagaac aggcaaaagg taaatttttt tttttttttt
1681 acaaccttaa gtaatctcaa taataaaatt ttctgatctg tattaaaaaa aaaaaaaaaa
1741 aaaaaaaaaa aa
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