LOCUS BC067089 3065 bp mRNA linear HUM 02-DEC-2004
DEFINITION Homo sapiens nucleoporin 210kDa, mRNA (cDNA clone MGC:71114
IMAGE:6281693), complete cds.
ACCESSION BC067089
VERSION BC067089.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3065)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3065)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (08-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Mark Watson
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: m Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27477133.
FEATURES Location/Qualifiers
source 1..3065
/db_xref="H-InvDB:HIT000262424"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71114 IMAGE:6281693"
/tissue_type="Spleen"
/clone_lib="NIH_MGC_113"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3065
/gene="NUP210"
/gene_synonym="FLJ22389"
/gene_synonym="GP210"
/gene_synonym="KIAA0906"
/gene_synonym="POM210"
/db_xref="GeneID:23225"
/db_xref="MIM:607703"
CDS 12..2915
/gene="NUP210"
/gene_synonym="FLJ22389"
/gene_synonym="GP210"
/gene_synonym="KIAA0906"
/gene_synonym="POM210"
/codon_start=1
/product="NUP210 protein"
/protein_id="AAH67089.1"
/db_xref="GeneID:23225"
/db_xref="MIM:607703"
/translation="MAARGRGLLLLTLSVLLAAGPSAAAAKLNIPKVLLPFTRATRVN
FTLEASEGCYRWLSTRPEVASIEPLGLDEQQCSQKAVVQARLTQPARLTSIIFAEDIT
TGQVLRCDAIVDLIHDIQIVSTTRELYLEDSPLELKIQALDSEGNTFSTLAGLVFEWT
IVKDSEADRFSDSHNALRILTFLESTYIPPSYISEMEKAAKQGDTILVSGMKTGSSKL
KARIQEAVYKNVRPAEVRLLILENILLNPAYDVYLMVGTSIHYKVQKIRQGKITELSM
PSDQYELQLQNSIPGPEGDPARPVAVLAQDTSMVTALQLGQSSLVLGHRSIRMQGASR
LPNSTIYVVEPGYLGFTVHPGDRWVLETGRLYEITIEVFDKFSNKVYVSDNIRIETVL
PAEFFEVLSSSQNGSYHRIRALKRGQTAIDAALTSVVDQDGGVHILQVPVWNQQEVEI
HIPITLYPSILTFPWQPKTGAYQYTIRAHGGSGNFSWSSSSHLVATVTVKGVMTTGSD
IGFSVIQAHDVQNPLHFGEMKVYVIEPHSMEFAPCQVEARVGQALELPLRISGLMPGG
ASEVVTLSDCSHFDLAVEVENQGVFQPLPGRLPPGSEHCSGIRVKAEAQGSTTLLVSY
RHGHVHLSAKITIAAYLPLKAVDPSSVALVTLGSSKEMLFEGGPRPWILEPSKFFQNV
TAEDTDSIGLALFAPHSSRNYQQHWILVTCQALGEQVIALSVGNKPSLTNPFPAVEPA
VVKFVCAPPSRLTLAPVYTSPQLDMSCPLLQQNKQVVPVSSHRNPRLDLAAYDQEGRR
FDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASGTTAI
TATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQAEL
RIREGSGYFFLNTSTADVVKVAYQEARGVAMVSLGHRSPLLVFIPYLGCCVVN"
BASE COUNT 648 a 936 c 866 g 615 t
ORIGIN
1 gcgcggcgag gatggcggcg cggggccggg ggctgctgct gctgacgctg tcggtgctgt
61 tggcggcggg cccctccgcc gctgcggcca agctcaacat ccccaaagtg ctgctgccct
121 tcacgcgggc cacgcgcgtt aacttcacgc tggaggcctc ggagggctgc taccgctggt
181 tgtccacccg gccggaggtg gccagcatcg agccgctggg cctggacgag cagcagtgct
241 cccagaaggc agtggtgcag gcccgcctga cccagcctgc ccgcctcacc agcatcatct
301 tcgcagagga catcaccaca ggccaggtcc tgcgctgtga tgccattgtg gacctcatcc
361 atgacatcca gatcgtctcc accacccgcg agctctacct ggaggactcc cccctggagc
421 tgaagatcca ggccctggac tccgaaggga acaccttcag cactctggct ggactggtct
481 tcgagtggac gattgtgaag gactccgagg cggacaggtt ctcagactcc cacaatgcgc
541 tgcgaatcct cactttcttg gagtctacgt acatccctcc ttcttacatc tcagagatgg
601 agaaggctgc caagcaaggg gacaccatcc tggtgtctgg gatgaagacc gggagctcca
661 agctcaaggc tcgcatccag gaggctgtct acaagaatgt acgccctgca gaagtcaggc
721 tgctgatttt ggaaaacatc cttctgaacc cggcctatga cgtctacctg atggtgggaa
781 cctccattca ctacaaggtg cagaagatca ggcaagggaa aattacagaa ctctccatgc
841 cttccgatca gtacgagttg cagcttcaga acagcatccc gggccccgaa ggagacccag
901 cccggccggt ggctgtcttg gcccaggaca cgtcgatggt cactgcactg cagctgggac
961 agagcagcct cgtccttggc cacaggagta ttcgcatgca aggtgcttct aggttaccca
1021 acagcactat ctacgtggtc gaacctggat acctagggtt cactgttcac cctggtgaca
1081 ggtgggtgct ggagaccggc cgcctgtatg aaatcaccat cgaagttttt gacaagttca
1141 gcaacaaggt ctatgtatct gacaacatcc gaattgaaac tgtgcttcct gctgagttct
1201 tcgaggtgct ctcgtcctcc cagaatgggt cataccatcg catcagggca ctaaagaggg
1261 gacagacggc cattgacgcg gccctcacct ctgtggtgga ccaggatgga ggggtccaca
1321 tactacaggt gcctgtgtgg aaccagcagg aggtggaaat tcacatcccg atcaccctgt
1381 atcccagcat cttgacattt ccgtggcaac caaagacggg cgcctatcag tacacaataa
1441 gggcccacgg tggcagtggg aacttcagct ggtcttcgtc aagccacctg gttgccacag
1501 ttactgtcaa gggcgtgatg accacaggca gtgacatcgg gttcagtgtg atccaggcac
1561 atgatgtgca gaacccactc catttcggtg agatgaaggt gtatgtgatc gagccccaca
1621 gcatggagtt tgccccgtgc caggtggagg cacgtgtggg ccaggccctg gagctgcccc
1681 tgaggatcag tggcctcatg cccggcgggg ccagtgaggt ggtcaccttg agcgactgct
1741 cccactttga cttggctgtc gaggtggaga accagggtgt gttccagcca ctcccaggga
1801 ggctgccgcc aggctctgag cactgcagcg gcatccgggt aaaggccgag gcccagggct
1861 ctaccacgct tcttgtgagc tacagacacg gccacgtcca cctgagtgcc aagatcacca
1921 ttgctgccta cctgcccctc aaggctgtgg atccctcctc tgttgccttg gtaaccctgg
1981 gctcctcaaa ggagatgctg tttgaaggag gtcccagacc ttggatcctc gagccgtcca
2041 aattcttcca gaacgtcacc gctgaggaca ctgacagcat cggcctggct ctctttgccc
2101 cccattcctc ccggaattat cagcaacact ggatccttgt gacctgtcag gccttgggtg
2161 agcaggtcat cgccctgtcg gtggggaaca agcccagcct caccaacccc tttcctgcgg
2221 tggagcctgc cgtggtgaag ttcgtctgcg ccccaccgtc caggctcacc ctcgcgcctg
2281 tctacaccag cccccagctg gacatgtcct gtccgctgct gcagcagaac aagcaggtgg
2341 tcccagtgtc cagccaccgc aacccccggc tggacctggc tgcttacgac caggagggcc
2401 gccggttcga caacttcagc tctctgagca tccagtggga gtccaccagg ccagtgttgg
2461 ccagcatcga gcctgagctg cccatgcagc tggtgtccca ggacgatgag agtggccaaa
2521 agaagctgca cggtttgcag gccattttgg ttcacgaggc atcaggaacc acagccatca
2581 ctgccactgc cactggctac caggagtccc acctcagctc tgccagaaca aagcagccgc
2641 atgaccctct ggtgcctctg tcggcctcca tagagctcat cctggtggag gacgtgaggg
2701 tgagcccaga agaggtgacc atctacaacc accctggcat ccaggcagag ctccgcatca
2761 gggaaggctc aggttacttc ttcctcaaca ccagcaccgc agatgttgtc aaggtggcct
2821 accaggaggc caggggtgtc gccatggtaa gcttgggcca tcggtcccca ctgttggttt
2881 tcattcctta tctgggctgt tgtgtggtta attgattgat cattttgaaa gctagcactt
2941 gactcacact cggaatccca gaactttggg aggtcaaggc aggaagatca cttgagccca
3001 ggagttcaag accagcctgg acaatatagt gagaccccca tctctacaaa aaaaaaaaaa
3061 aaaaa
//