LOCUS BC066990 2021 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens hypothetical LOC441242, mRNA (cDNA clone MGC:87648
IMAGE:5267764), complete cds.
ACCESSION BC066990
VERSION BC066990.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2021)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2021)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: m Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61806674.
FEATURES Location/Qualifiers
source 1..2021
/db_xref="H-InvDB:HIT000262410"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87648 IMAGE:5267764"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2021
/gene="LOC441242"
/db_xref="GeneID:441242"
CDS 898..1848
/gene="LOC441242"
/codon_start=1
/product="hypothetical LOC441242"
/protein_id="AAH66990.1"
/db_xref="GeneID:441242"
/translation="MRGPDQMEIRGGPYLLLGEVVGHSALGAQPAQAANGDADELLEL
SALLQPRAGRGPCATLSGRCITPATALLLLSHRLRAQCRPMQATAAEAGSPGLGRLGK
EPPSRESWTGSAPRRCPCQDASRAGSGVCRSRPQSRGGGSRKPRRQKAAATGAKSRGG
AGKKLRRRGQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRRGGQK
AVGAGAKKPQKAAAAGTKTPRRRRQKAAKAAVWGQKAAAGESLTPNSLASVSFSRPMF
LRHYPFSSCECKSHKHGSTFDHFNCLTFHVTRPSTIESMY"
BASE COUNT 488 a 582 c 582 g 369 t
ORIGIN
1 ggaactccag gtgctgggtc ttccaggagc gcgcctgcgc gggagggtga ccacaggcgg
61 ccgggcggga tgtcctgtcc gcagtcttca gcccagccgc cgccacccat aagctatgag
121 gaggagttta cgaccacctg gactactacc acctgcgtga cttcccggcc tgcggggtcc
181 gcgcagcaaa ggcttgacgc tgctggagca ggcgctgcgc acctactggc tggcgcctgg
241 taggcacgag cgcagggtcg cccagaagct cctcaatggc ctgagcaagt accagccagc
301 gccagctgca gccctggccg cgcactcgcc tcagctgagc ctgggaatga agaagctgtt
361 tctttacaca atcgttatcc cataatgcct gcttctgctg ctaccacggg ctcacctaaa
421 aggcaaccaa agggaggaac aggaagagaa gagtgtggcc tcctagaaat ctagcacgga
481 gaaagttact catccttcaa aactcagttc agagatcagc tcctccaaga aggcttctgt
541 ggttgtggtt ggtgctcttt cctaccagta ccagctgtcc tgagagcacg tctctacatc
601 tctacctgcc ttctggaaac cgggagaaag ccaaaacgga tgacaagaca ctagatcagc
661 cgtgtccaac cctgtgacta caaggacttt tccgcctatc tttggtgaga cggggtctca
721 ctgtattgtc caggttggtc tcaaactctt tgactcaagg gatccaggac aggataacag
781 gtgtgagcca ccacacctgg ccatgtgcat gaacttttaa gacaaacaca aggccccaca
841 aaaggggttc ctggcaagtc agttctccct caggcctttg gtttcctcac ctacaagatg
901 agagggccgg accagatgga aattcggggg ggtccgtatc tcctgctcgg tgaggtcgtt
961 ggacacagcg cacttggtgc ccagcccgcg caggctgcca atggagatgc cgatgagctt
1021 ctggagctgt ccgcactgct gcagccccgg gctggccggg gcccctgcgc caccctcagc
1081 ggccgctgca tcacccccgc caccgccctc cttcttctct cccatcgcct ccgcgcgcag
1141 tgccgcccta tgcaggccac agcggccgag gcagggagcc cggggctcgg gcgcctaggc
1201 aaggaacccc cgagccggga gagctggacc gggagcgccc ctcggcgctg cccttgccag
1261 gacgccagta gagctggcag cggagtctgc cgctcccgcc ctcagagccg cggcggcggg
1321 agcagaaagc cgcggcggca aaaagccgcg gcgacggggg caaaaagccg cggcggcgca
1381 ggcaaaaagc ttaggcggcg ggggcaaaaa gccgcggcgg cgcaggcaaa aagcttaggc
1441 ggcgggggca aaaagccgcg gcggcaaaaa tgcgcggcgg cggggcaaaa agccgcggcg
1501 gaagaaagcc gccggggcgg gggcaaaaag ccgcggcggg ggggacaaaa agcagtggga
1561 gctggggcaa aaaaaccaca aaaagccgcg gcggcgggga ccaaaacgcc gcggcggcgg
1621 aggcaaaaag ctgcaaaagc cgcggtgtgg gggcagaaag ccgcagcggg agaaagtctc
1681 actccaaatt cccttgcttc agtaagcttc tctaggccaa tgttccttcg gcattaccca
1741 ttttcttcct gtgaatgcaa atcacataaa catggaagta catttgacca ttttaattgt
1801 ttaacattcc atgtcacacg accttccaca atagaatcaa tgtattaaaa tgtgttaacg
1861 accacacatt ttacacaaat gccatgaatc cttaaggtgt tccaatttat aaaatatgtc
1921 tgcaaatcat actttatgat gctttgtatt ctgtcggtaa ttggatgtca tatatttaaa
1981 ttctattaaa ctgcttatta aaatgaaaaa aaaaaaaaaa a
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