LOCUS BC066986 2418 bp mRNA linear HUM 19-MAR-2009
DEFINITION Homo sapiens chromosome 6 open reading frame 201, mRNA (cDNA clone
MGC:87625 IMAGE:4827732), complete cds.
ACCESSION BC066986
VERSION BC066986.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2418)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2418)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: g Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45597461
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..2418
/db_xref="H-InvDB:HIT000262406"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87625 IMAGE:4827732"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2418
/gene="C6orf201"
/gene_synonym="dJ1013A10.5"
/db_xref="GeneID:404220"
/db_xref="HGNC:HGNC:21620"
CDS 371..766
/gene="C6orf201"
/gene_synonym="dJ1013A10.5"
/codon_start=1
/product="C6orf201 protein"
/protein_id="AAH66986.1"
/db_xref="GeneID:404220"
/db_xref="HGNC:HGNC:21620"
/translation="MASGPLGPGARPTRLHPPFPPPAHIKPGAPPGENPELSGLERIL
ARHQLPKEINLTPKPNRMPPWKRKIINNVTDGWKKCHLLKRNTKEPPMSTIVVRKLIQ
KNVPRRHSLRNTSRKLRNLPTTAKGTQTE"
BASE COUNT 733 a 647 c 537 g 501 t
ORIGIN
1 ggggcgcggg gtcgccgccg gccgcccagg cgcggagcct ctcgggggtc acccggccgc
61 cgggcccgcg ggacgcacgg ggccgccagg ggaggacaac aagcctcagg ccctgtccct
121 gcgccccgcc cggcctcccc cgcggggctg cgcagcccac tcggccatcc tggcctgaag
181 gggccgcccc cggcctcgcg ggaaagcctg agcctcccgg gccttctcgg gccttctcgg
241 actttccccc aggcgtcctg gaccttcttc ggccttcctg ggcctcctcg ggcttccttg
301 accctcccca ggccttcccc gaggcctcca ggcccttccc tgggcctctc caggctgagc
361 tctccgcgac atggccagtg ggcctctggg acccggggcc cggcccaccc gcctccaccc
421 tccattccca ccgcctgctc acatcaagcc aggagcaccg cccggtgaga atcctgaact
481 ctctggctta gaaagaatct tagcaagaca tcagttgcca aaagagatta atctgacccc
541 aaagccgaac agaatgcccc cgtggaaaag aaaaatcatc aacaatgtaa ctgacgggtg
601 gaagaaatgt cacttgttga agagaaacac gaaagagcct ccaatgtcca ccatagttgt
661 cagaaaactt attcaaaaaa atgtacccag aagacacagc ctaaggaata caagcaggaa
721 actgagaaac ctgccaacaa cagctaaagg gacacaaaca gaataacatg aaagctgtat
781 acctattgtg gaatttgatt agaatccgga acagtcagag ttggaacaat gttcacaaca
841 aaatgcaagt taataatgaa ggaaaaataa aatcagtcaa atcagcctaa tgctttggga
901 aaaatctaaa ttcagttaat tctaccacaa acaacatgta acctgcttat gactggcaac
961 gctgaaggag gattcaaagg ctctcatctc gcgctgcttg cctgacctct tgctttctag
1021 gagctgactt accctgtcag atgcatacac ggcatcgaat agcccaagga gggtgacgga
1081 gatgcccaca gctggaccat tgaccactgc aatcagaggc ttaggaaaat ctataaaaca
1141 gcccacaaat tccctacaga aatggaaaca caaaatcatt aaatgtgcca aagcagcatg
1201 actaaagcat gggcaagaca gtctgactct gagataaagc cttctgtcag gctgggtgtt
1261 tccacagcca ccaccagcag tgcctccttg tcctgccact tccctggtct tccgcaccag
1321 attcatccag ggcatccgtc tgaatggcag tggatggaag accaaccagt gagacctatg
1381 ggtcaaccct ggtttgaatc ttgtattctg gacggtgagt tcagggctgt aaaccagccg
1441 cagtcttaga gattaggttg ggtgactgag cacatgctgc aatatcacaa caagtgggaa
1501 ttacagattt ggcaggaata aagagaaaag ccttcatgac ctcctcctgt gtttacaaga
1561 ctcctccgag tctcctacct tcagcgttca tggaaatctc ccattcctct ggctggatga
1621 gaatttgcta aattcctctg cctcagtgca agataatttt gtttacaact atagctcact
1681 tttatgtttt ccagtcaaat ctcatgagac cagcaggatg aacaggtaac agaggtcaaa
1741 gagaaagaat gaatgcccac ctatggatgg aggcagttta gagaaatatg cttgtccaaa
1801 gtcacaatta actgcactga cacagagaag cagatattgc acttttgctc aactaaatac
1861 cactttgatg actaagaacg ggccctctgg gatcagacaa aggaaaatca cagtgccttc
1921 tgggtatatc agaacctacc tgaaattcac aaactctaaa caatgaatgc tcaactctgt
1981 tgtatgaagt agccacaatt accaaccttc ctgcacaaat caaacaagag atatcttaaa
2041 ataggaatga tgctgaaact ctacagcttt tgtgtgaaac acatagaaga agaaagtaaa
2101 acaggacaaa ctccgtgggc aggctccacc tgactagagg attccaatga aggactcaaa
2161 ctggacacca aatccacata gttctgcctg gcagcttcct gaacggacga tgacaaacaa
2221 cctcagccca tggtcaatga ataagcactt tgagaaagtt actatactaa taactaacac
2281 cttgcaatga agaaagaata gaagcacatc aagatcttga agactccatt tacaatggct
2341 taatgagaag cacaaacttc tttagaagta cagcaaataa aagcacagta actagtaaac
2401 ccaaaaaaaa aaaaaaaa
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