LOCUS BC066980 1939 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens chromosome 5 open reading frame 25, mRNA (cDNA clone MGC:87612 IMAGE:4821958), complete cds. ACCESSION BC066980 VERSION BC066980.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1939) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1939) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 167 Row: e Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 38348409 The stop codon of the CDS annotated on this record is located > 55 bases upstream of a splice junction, and therefore the mRNA is predicted to be subject to nonsense-mediated mRNA decay (NMD). FEATURES Location/Qualifiers source 1..1939 /db_xref="H-InvDB:HIT000262400" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:87612 IMAGE:4821958" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1939 /gene="C5orf25" /db_xref="GeneID:375484" /db_xref="HGNC:HGNC:24779" CDS 144..1517 /gene="C5orf25" /codon_start=1 /product="C5orf25 protein" /protein_id="AAH66980.1" /db_xref="GeneID:375484" /db_xref="HGNC:HGNC:24779" /translation="MEDFIVISDDSGSESSGGARPGRSRRPRRALSRTSGALPRRTVN KGQKLEPIPHRRLRMVTNTIEENFPLGTVQFLMDFVSPQHYPPREIVAHIIQKILLSG SETVDVLKEAYMLLMKIQQLHPANAKTVEWDWKLLTYVMEEEGQTLPGRVLFLRYVVQ TLEDDFQQTLRRQRQHLQQSIANMVLSCDKQPHNVRDVIKWLVKAVTEDGLTQPPNGN QTSSGTGILKASSSHPSSQPNLTKNTNQLIVCQLQRMLSIAVEVDRTPTCSSNKIAEM MLGFVLDIPERSQREMFFTTMESHLLRCKVLEIIFLHSCETPTRLPLSLAQALYFLNN STSLLKCQSDKSQWQTWDELVEHLQFLLSSYQHVLREHLRSSVIDRKDLIIKRIKPKP QQGDDITVVDVEKQIEAFRSRLIQMLGEPLVPQLQDKVHLLKLLLFYAADLNPDAEPF QKGWSGS" BASE COUNT 526 a 507 c 472 g 434 t ORIGIN 1 gctcggggcg gggccggcgt ggcggtggcc cgggttgtag ccgccgccgc tgccgccgcc 61 cccgccgccg ccacctcaga agcaggaacc gaagtcgtcg ccgccgccgc cactgcctgg 121 gtcttcggtc ggggcccgca gccatggagg atttcatcgt gatctcggac gacagcggct 181 ctgagagctc cgggggcgcc cgcccgggcc ggtcgcggag gccgcgccgg gccctgtcgc 241 gaacctccgg cgcgctgccc cgccggaccg tgaacaaggg tcaaaaatta gaacccatcc 301 ctcatcgaag actaagaatg gtaacaaata ccattgaaga gaattttcct ctggggactg 361 tgcagttttt gatggacttt gtgtcacccc agcattaccc accaagagaa atcgtggctc 421 acatcatcca gaaaatcttg ctcagtggct ctgagactgt ggatgtccta aaggaggcct 481 acatgcttct catgaaaatt caacagctac atccagccaa tgccaagaca gtggagtggg 541 actggaaact gctcacctat gtcatggagg aagagggaca aactctgcct gggcgagtcc 601 ttttcctgcg ttatgtcgtt cagaccctag aagatgactt tcagcagacc ctgaggaggc 661 aacggcagca cctgcagcaa tccattgcaa acatggtgct ttcctgtgac aagcagcccc 721 acaatgtcag ggatgttatc aagtggctgg tcaaagcagt aactgaagat ggattgactc 781 agcccccaaa tggaaatcaa acgtcttcag gaacaggaat cttgaaagcc agcagtagcc 841 acccttcttc ccagcccaac ctgacaaaga acaccaatca gctgattgtg tgccagcttc 901 agaggatgct ctccatagcc gtagaggtgg acaggacccc cacctgcagc tccaataaaa 961 ttgccgagat gatgttgggg tttgtgctgg acattcctga gaggagccag agagaaatgt 1021 tctttactac catggaaagc caccttctgc gctgcaaagt gttagaaatc atattcctcc 1081 acagctgtga gacacccacc cgcctgcctc tgtctctggc ccaggccctc tactttctga 1141 ataattctac gtcactgctc aagtgtcagt cagataaaag ccagtggcag acttgggacg 1201 aattggttga gcatctgcag tttctgctgt ccagttatca acatgtttta agagaacact 1261 taaggagttc cgtgatcgac cgaaaggact taataatcaa aaggattaag cccaaacccc 1321 agcaaggaga tgacatcaca gtggtagacg tagagaagca gattgaggcc ttccgcagcc 1381 gcctgatcca gatgctgggg gagcctcttg tcccccaact ccaagacaaa gtgcacttgt 1441 tgaagctcct gctcttctat gctgcggact tgaaccctga tgcagagccc tttcaaaagg 1501 gctggagcgg ctcctgaggg cctgccaagc actgaatgcc aagaatacct cctgaactct 1561 ctctccaact gctcagaagc tctaaaagca tgaaaagtgg ttaaaatctt acaggaccaa 1621 acctgcatta tttaatcagt taatactctg tgcatcacat gtttaacatt ttcattcaag 1681 atgtggaaaa aatccctctg ctgaacctag tctatacacc aatattatgt cattcaaggt 1741 accgacaacc tgtttcagga gagagacgtt catttttccc taatgaaatg caagcattct 1801 gttagaccta ttatattgcc tgttaatttg actgtaatga atagggggta gaaacaaaag 1861 gatcaagtgt gttataaaac atttgatgtt aaaaggagac aataaaaagg caatggtttt 1921 tccaaaaaaa aaaaaaaaa //