LOCUS BC066962 1285 bp mRNA linear HUM 17-DEC-2007
DEFINITION Homo sapiens SRR1 domain containing, mRNA (cDNA clone MGC:87474
IMAGE:4820477), complete cds.
ACCESSION BC066962
VERSION BC066962.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1285)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1285)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: e Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61966838.
FEATURES Location/Qualifiers
source 1..1285
/db_xref="H-InvDB:HIT000262382"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87474 IMAGE:4820477"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1285
/gene="SRRD"
/gene_synonym="HC/HCC"
/gene_synonym="srr1l"
/db_xref="GeneID:402055"
/db_xref="HGNC:HGNC:33910"
/db_xref="MIM:602254"
CDS 12..1010
/gene="SRRD"
/gene_synonym="HC/HCC"
/gene_synonym="srr1l"
/codon_start=1
/product="SRR1 domain containing"
/protein_id="AAH66962.1"
/db_xref="GeneID:402055"
/db_xref="HGNC:HGNC:33910"
/db_xref="MIM:602254"
/translation="MAAAAAAALESWQAAAPRKRRSAARRPRRREAAPRGREAAPRGP
EAELESDSGVVLRRIWEAEKDLFISDFWSSALETINRCLTKHLEQLKTPVGTLSDIFG
NLHLDSLPEESDVATDSIPREILVTGTCHLKCVCYGIGNFATCIVARNQLTFLLLLLE
KCQIPRSHCWVYDPLFSQLEIEVLNTLGVTVLSENEEGKRSIRGEPTIFYMLHCGTAL
YNNLLWSNWSVDALSKMVIIGNSFKGLEERLLARILQKNYPYIAKILKGLEELEFPQT
SQYMDIFNDTSVHWFPVQKLEQLSIDIWEFREEPDYQDCEDLEIIRNKREDPSATD"
BASE COUNT 333 a 289 c 348 g 315 t
ORIGIN
1 gtccgagacc aatggctgcg gccgcagctg cggcgctgga atcctggcag gcggcggctc
61 cgcggaagag gcgctccgcg gctcgacggc cgcggcggag ggaggcggcg ccccggggga
121 gagaggcggc gccccggggc cccgaggcgg agttagagtc tgacagcgga gtcgtgcttc
181 gtcgcatctg ggaggctgag aaggacctgt ttatctctga tttctggagt tcagcactag
241 aaaccatcaa tagatgtcta acaaaacatc tggaacaact gaagacccct gtggggactc
301 tttcagacat ctttggaaac ctgcatcttg actcattgcc agaggagtca gatgtggcca
361 ctgattctat cccaagagag atcttggtca caggaacctg ccatttgaag tgtgtgtgtt
421 acggcattgg gaactttgcc acctgcatcg tagctagaaa ccagctaacg tttttgctgc
481 ttttgttgga aaagtgccag attcccagaa gtcactgttg ggtatatgac cctctgttta
541 gccaacttga aattgaagtc cttaacaccc ttggtgtgac tgttctcagt gagaacgagg
601 aagggaaacg gagtattcgc ggggagccta ccatctttta catgctccat tgtgggacgg
661 ccttgtacaa caatctttta tggagtaact ggtcagtaga tgccctttct aagatggtca
721 tcattgggaa cagtttcaaa ggacttgagg agaggttgtt ggcaaggatt ctgcagaaaa
781 attatcccta cattgcaaag attttaaaag gactggagga gcttgagttt cctcagactt
841 cacaatacat ggacatattt aatgatacct ctgtccactg gttccctgtg caaaagctag
901 aacagctctc catagatatt tgggagtttc gggaagaacc agattatcag gactgtgagg
961 accttgaaat catcaggaac aagagagaag atccttctgc tactgactga actcgttgtg
1021 aggtactcag tgttggctga ggtagaagct gccaccagag actaaaggga aggctgctat
1081 ggaggaacta cagagaactc ctttgccagg aaagaacatc aacttggctg tcctgttttg
1141 aggacgatac cccacatgag gacttggtat aaagattcct gccctacgtg gcattgtccc
1201 gttttacatc cttccctcat gacctggcct gatgtggagt agctcctgag taaagaagtt
1261 acccttttga aaaaaaaaaa aaaaa
//