LOCUS BC066943 1104 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens proline rich 13, mRNA (cDNA clone MGC:87320
IMAGE:4817871), complete cds.
ACCESSION BC066943
VERSION BC066943.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1104)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1104)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: d Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 53759130.
FEATURES Location/Qualifiers
source 1..1104
/db_xref="H-InvDB:HIT000262364"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87320 IMAGE:4817871"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1104
/gene="PRR13"
/gene_synonym="DKFZp564J157"
/gene_synonym="FLJ23818"
/db_xref="GeneID:54458"
/db_xref="HGNC:HGNC:24528"
CDS 64..510
/gene="PRR13"
/gene_synonym="DKFZp564J157"
/gene_synonym="FLJ23818"
/codon_start=1
/product="proline rich 13"
/protein_id="AAH66943.1"
/db_xref="GeneID:54458"
/db_xref="HGNC:HGNC:24528"
/translation="MWNPNAGQPGPNPYPPNIGCPGGSNPAHPPPINPPFPPGPCPPP
PGAPHGNPAFPPGGPPHPVPQPGYPGCQLLGPYPPPYPPPAPGIPPVNPLAPGMVGPA
VIVDKKMQKKMKKAHKKMHKHQKHHKYHKHGKHSSSSSSSSSSDSD"
BASE COUNT 274 a 304 c 248 g 278 t
ORIGIN
1 ggctgcgaag gagaacgcag caagcccagg cggcggtgga aaggctggag gacacaccta
61 aacatgtgga atcccaatgc cgggcagcca gggccaaatc catatccccc caatattggg
121 tgccctggag gttccaatcc tgcccaccca ccacctatta atccaccctt tcccccaggc
181 ccctgtcctc ctcccccagg agctccccat ggcaatccag ctttcccccc aggtgggccc
241 cctcatcctg tgccacagcc agggtatcca ggatgccaac tgttgggtcc ctaccctcct
301 ccatacccac cgcctgcccc tggaatccct cctgtgaatc ccttggctcc tggcatggtt
361 ggaccagcag tgatagtaga caagaagatg cagaagaaaa tgaagaaagc tcataaaaag
421 atgcacaagc accaaaagca ccacaagtac cacaagcatg gcaagcattc ctcctcttcc
481 tcctcctctt ccagcagtga ttctgactga atacaggccc tggacccttc cctcaagtct
541 caccagttct gctctcccat caagcttcag atgccatgtt gtactggggg aatgtagccc
601 ttgtgctccc caccccctac ctccacctgg gcctcaccct gctgttgagc cctgagtggc
661 taggggaaat gggaagagga ttgccatggc ctggccatct tgttgctgct tggttagatc
721 atatagctaa tgaattaggc aggggagcta ttttttgaag atgatgaact aaatgttgaa
781 gacaagtttg agatctgtaa aatgtgattt tttacttcca cttataatac ttgtgattgg
841 ggaggtttgt ggaaattcaa ttatgatgaa aaacctatct tttttgtaat gttggcatac
901 ttggggaatt tagtggcaaa tacattcccc agcaggcctt ttgttggttg cactaactgc
961 aaggttgctg ggaagtagag tccatttggt tgatgagctt tgactgcggt tttggaacct
1021 tacctctcct ccttagccca atatgctgtc ttgggtccta ttcaaataaa gttatttctc
1081 ctggtcacaa aaaaaaaaaa aaaa
//