LOCUS       BC066942                1849 bp    mRNA    linear   HUM 28-JUL-2005
DEFINITION  Homo sapiens PR domain containing 5, mRNA (cDNA clone
            IMAGE:4375822), complete cds.
ACCESSION   BC066942
VERSION     BC066942.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1849)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1849)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (01-MAR-2004) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 167 Row: b Column: 17
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 41349475
            This clone has the following problem: The cds is short compared to
            the longest cds in the locus.
FEATURES             Location/Qualifiers
     source          1..1849
                     /db_xref="H-InvDB:HIT000262363"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:4375822"
                     /tissue_type="Brain, hippocampus"
                     /clone_lib="NIH_MGC_95"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..1849
                     /gene="PRDM5"
                     /gene_synonym="PFM2"
                     /db_xref="GeneID:11107"
     CDS             263..598
                     /gene="PRDM5"
                     /gene_synonym="PFM2"
                     /codon_start=1
                     /product="PRDM5 protein"
                     /protein_id="AAH66942.1"
                     /db_xref="GeneID:11107"
                     /translation="MLGMYVPDRFSLKSSRVQDGMGLYTARRVRKGEKFGPFAGEKRM
                     PEDLDENMDYRLMWEVRGSKGEVLYILDATNPRHSNWLRFVHEAPSQEQKNLAAIQDK
                     NLGPAEWRG"
BASE COUNT          497 a          432 c          494 g          426 t
ORIGIN      
        1 gcggccaggc ccgcgccccc cgcgcccccg cagcaggaat ggcaggaacg gatccgggcc
       61 gagcccgacc cgggacgagg aggggctgag ccgcggggga tcctggaatc ggcagggagg
      121 tggggattct gggaggaaaa ctccatttcc tccttccctg ccggtttctc ccctctaccc
      181 tggcacccca aatttcgatg tgccgcctgc cgggcgctaa gcgccggtgt tgagagaggc
      241 ggcggccgcc gcgcccggga aaatgctggg catgtacgtg ccggacaggt tctccctgaa
      301 gtcctcccgg gttcaggacg gcatggggct ctacacggcc cgcagagtgc gaaagggtga
      361 aaagttcgga ccctttgctg gagagaagag aatgcctgaa gacttggatg aaaatatgga
      421 ttacaggttg atgtgggagg ttcgtgggag taagggagaa gttttgtaca ttttggatgc
      481 taccaaccca cggcactcca actggcttcg cttcgttcat gaggcaccat ctcaggagca
      541 gaagaacttg gctgccattc aagacaagaa tttgggaccc gccgaatggc gaggctaaaa
      601 gagctgtaac acagacaaga ctgagacctg ctccttgctt gccacattgc gagtgaagag
      661 aaggagagaa gagctgcagc ctttcaggga tcccagacct gggagctccc caagccaggg
      721 ctgtgactcc ttctttgggg tgctgcagtt cctggtgtct ccgagcttct ggatgccact
      781 gtgttccctg gtgtcagctg tggaagctac ttgcggtgtg cctgtcacag ctgcagcctg
      841 gcagagagct ggcacctgtg ctggcacctg gagctgccca cccttctgca gcagccggca
      901 tatctgactg tgcattggcc agaccccaca ctcactctca caccccttgc cgctccatgc
      961 agtctccctt ggcaggtgtg gaatccaggc cattagtgtg agctgaacac agcctgccag
     1021 gtcgagtgag cagaatgagc tcagtgggct gaagcaaaaa tttgggcaaa ggcacgactg
     1081 gccacagagg tttccagcca gaaaagcaac accccaaaga tcccataata ataggagtgc
     1141 aaaacctgtt gtaaactgtg catgccaggg atctaggttg tgtgttcctt atgagaatct
     1201 agctaatgcc tggtgatctg aggtggaaca gttttatccc aaaaccatcc ccagccccat
     1261 ccctgtccat ggaaaaactg tcttccacaa aacctgttcc tggtgccaaa aaggttgggc
     1321 actgctattc tataccgctg taggatgact atagttaaca ataatatata gtttcaaaaa
     1381 gctagaagga agacattgaa tgttcccaac acaaagaaat gatacatgtt tgagatgatg
     1441 gatatgctga ttatcttgat ctgatcacta tacatgatat gtattgtaac atcactaggt
     1501 accccatgaa tatgtacaat tatgtgtcaa gataaataag taataaaata aaaagcttta
     1561 tcttattccc caaaaaaaga cagcttgagg aaaggaaaaa ggaagattac tagcagagtt
     1621 gtaggctatt gtctatggta ctttactgca tgaggaaggt acagaggctg aatggaagag
     1681 gggttgtaaa attggagtat gggctttcct ttcacatgga gctttgttta acagaagtct
     1741 agaaagtaga tataagaatc attatcatgg ttagtttatg tcaaaactat acatactgtc
     1801 ttattatact taattaaatg ggtaatcatt tgagaaaaaa aaaaaaaaa
//