LOCUS BC066935 1916 bp mRNA linear HUM 11-AUG-2005
DEFINITION Homo sapiens chromosome 8 open reading frame 41, mRNA (cDNA clone
MGC:87253 IMAGE:4839169), complete cds.
ACCESSION BC066935
VERSION BC066935.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1916)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1916)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: i Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376690.
FEATURES Location/Qualifiers
source 1..1916
/db_xref="H-InvDB:HIT000262356"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87253 IMAGE:4839169"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1916
/gene="C8orf41"
/gene_synonym="FLJ23263"
/db_xref="GeneID:80185"
CDS 157..1683
/gene="C8orf41"
/gene_synonym="FLJ23263"
/codon_start=1
/product="C8orf41 protein"
/protein_id="AAH66935.1"
/db_xref="GeneID:80185"
/translation="MELDSALEAPSQEDSNLSEELSHSAFGQAFSKILHCLARPEARR
GNVKDAVLKDLGDLIEATEFDRLFEGTGARLRGMPETLGQVAKALEKYAAPSKEEEGG
GDGHSEAAEKAAQVGLLFLKLLGKVETAKNSLVGPAWQTGLHHLAGPVYIFAITHSLE
QPWTTPRSREVAREVLTSLLQVTECGSVAGFLHGENEDEKGRLSVILGLLKPDLYKES
WKNNPAIKHVFSWTLQQVTRPWLSQHLERVLPASLVISDDYQTENKILGVHCLHHIVL
NVPAADLLQYNRAQVLYHAISNHLYTPEHHLIQAVLLCLLDLFPILEKTLHWKGDGAR
PTTHCDEVLRLILTHMEPEHRLLLRRTYARNLPAFVNRLGILTVRHLKRLERVIIGYL
EVYDGPEEEARLKILETLKLLMQHTWPRVSCRLVVLLKALLKLICDVARDPNLTPESV
KSALLQEATDCLILLDRCSQGRVKGLLAKIPQSCEDRKVVNYIRKVQQVSEGAPYNGT
"
BASE COUNT 509 a 469 c 474 g 464 t
ORIGIN
1 agcgatatga gctaggtccg gatcctgtta gacaccggcg ggcgcgagcc gttgcagttc
61 tctttgggtg atcgctcctt ccctcttcaa cggatccctc cccgcctcca tcctcgttct
121 gtgggagaga ccagccttct ggtgctgcag tcaggaatgg agcttgacag cgctctggaa
181 gccccatcgc aggaagactc taatttgtcc gaggagttgt ctcactccgc ctttggacag
241 gccttctcca agattttaca ctgtcttgcc cgcccggagg cacgacgagg caatgtaaaa
301 gatgcagttc ttaaagacct cggtgatcta atagaagcca cagaatttga taggttattt
361 gaggggactg gtgcacggct ccgcggaatg ccggagacac tggggcaggt agcaaaagcc
421 ctggagaagt atgcagcccc ctccaaggag gaggaaggtg gaggtgatgg gcactccgaa
481 gcggccgaga aagcagccca agttgggtta ctgtttctta aactgttagg gaaagttgag
541 actgctaaga attccctggt cggccctgca tggcagacgg gcctgcatca cttggcagga
601 cccgtttata tttttgccat cacacacagc ttggagcaac catggaccac tccgagatct
661 cgggaagttg ctagggaggt gctcacctca ctgcttcaag ttactgaatg cggttctgtg
721 gcaggattcc tacatggaga aaatgaagat gagaaaggga gactttcggt gatactaggg
781 cttctcaaac ccgacttgta taaggaatcc tggaagaata accctgccat caaacatgtt
841 ttctcatgga ctctgcaaca ggtcactcgg ccctggctga gccagcatct ggaaagggta
901 cttcccgcat cattggtcat ttcagatgac tatcagactg agaacaaaat cctgggtgta
961 cactgtctcc atcacattgt gcttaatgtg ccagctgctg atttgctcca gtataacaga
1021 gcccaggtcc tataccatgc catttccaac cacctgtaca caccagagca ccacctcatt
1081 caggctgtgc tcctgtgtct gctggattta ttccccatcc tggagaaaac cctgcactgg
1141 aaaggagatg gagctcgacc caccacccat tgtgatgagg tcctgcggct gatcctgacc
1201 cacatggagc cagagcaccg ccttctttta cgcaggacct acgcaagaaa cctgccggct
1261 ttcgtgaaca ggttggggat cctaactgtc cggcacttaa agaggctgga gagagtcatc
1321 attggttatc tggaggttta tgatggacct gaggaggaag ctagactgaa gatattggaa
1381 accctaaaac ttctcatgca acatacttgg cccagagttt cctgcagact tgtggtctta
1441 ctgaaggccc tcttgaaact gatttgtgat gtagcaaggg atccaaacct tacacctgag
1501 tctgttaaga gcgccctgct acaggaggcc acagactgcc tgattctcct ggaccgctgt
1561 tctcaaggac gggtaaaggg tctcctggcc aaaattcccc aaagctgtga agacagaaaa
1621 gtggtgaact atatcagaaa agtgcagcag gtttctgaag gcgcacccta caatggaact
1681 taagacttgt attactttcc caagaggaaa ggattttctt cccatcccaa tttgtatgaa
1741 tggagttatt taagaaaaaa agatattttt acacgaaact ttgtaagtga aagctgcttt
1801 ttccttcctt cctttccttt tacctccata agaataggga aagtagaaca agaaaaaatt
1861 gaactccttc catttctaaa taaagtttgg gagaaaaaag aaaaaaaaaa aaaaaa
//