LOCUS BC066919 2458 bp mRNA linear HUM 19-JUN-2008
DEFINITION Homo sapiens ring finger protein 114, mRNA (cDNA clone MGC:87140
IMAGE:5264729), complete cds.
ACCESSION BC066919
VERSION BC066919.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2458)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2458)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: k Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40807455.
FEATURES Location/Qualifiers
source 1..2458
/db_xref="H-InvDB:HIT000262340"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87140 IMAGE:5264729"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2458
/gene="RNF114"
/db_xref="GeneID:55905"
/db_xref="HGNC:HGNC:13094"
CDS 15..701
/gene="RNF114"
/codon_start=1
/product="ring finger protein 114"
/protein_id="AAH66919.1"
/db_xref="GeneID:55905"
/db_xref="HGNC:HGNC:13094"
/translation="MAAQQRDCGGAAQLAGPAAEADPLGRFTCPVCLEVYEKPVQVPC
GHVFCSACLQECLKPKKPVCGVCRSALAPGVRAVELERQIESTETSCHGCRKNFFLSK
IRSHVATCSKYQNYIMEGVKATIKDASLQPRNVPNRYTFPCPYCPEKNFDQEGLVEHC
KLFHSTDTKSVVCPICASMPWGDPNYRSANFREHIQRRHRFSYDTFVDYDVDEEDMMN
QVLQRSIIDQ"
BASE COUNT 601 a 557 c 611 g 689 t
ORIGIN
1 agtgcggcag caagatggcg gcgcaacagc gggactgcgg gggtgctgcg cagctggcgg
61 ggccggcggc ggaggctgac cccctaggac gcttcacgtg tcccgtgtgc ttagaggtgt
121 acgagaagcc ggtacaggtg ccctgcggac acgtcttttg ctctgcatgc ctgcaggaat
181 gtctgaagcc gaagaagcct gtctgtgggg tgtgtcgcag cgctctggca cctggcgtcc
241 gagccgtgga gctcgagcgg cagatcgaga gcacagagac ttcttgccat ggctgccgta
301 agaatttctt cctgtccaag atccggtccc acgtggctac ttgttccaaa taccagaatt
361 acatcatgga aggtgtgaag gccaccatta aggatgcatc tcttcagcca aggaatgttc
421 caaaccgtta cacctttcct tgtccttact gtcctgagaa gaactttgat caggaaggac
481 ttgtggaaca ctgcaaatta ttccatagca cggataccaa atctgtggtt tgtccgatat
541 gtgcctcgat gccctgggga gaccccaact accgcagcgc caacttcaga gagcacatcc
601 agcgccggca ccggttttct tatgacactt ttgtggatta tgatgttgat gaagaggaca
661 tgatgaatca ggtgttgcag cgctccatca tcgaccagtg agcagagtcc gtgcttgcta
721 tctgtctcat gttacagagc ttccattaca tattaaacgt gaaatctatg actcctgtac
781 cttacctgtt caacagacct gaaaatgagc catggcattg ggacagggtc acttctgaca
841 ggggaagtgg gtccccaggt cagcccttct cttccctttg ggctcttgcc aaagctgtct
901 tcccctactg ttaaccttgt ttgtcacacg gtcgagttcg tattggttct cggctacttc
961 ctggagcttc tgccgcctcc tgtggaagat aatctagctt ctccgcctct tgtttcacac
1021 tcattcctcc catccagtgt ttgtctctcg ggtccttcaa gccagccagg accttttctg
1081 ggtcatgaat agcacaatga agcaagtgtc tcctttcctt gtccccaagg tgtgcagact
1141 ttggcagccg tgcacctgac cagagctgaa gctcccgctg ggctgtgggg ttgccagaag
1201 ctggggttgc catcccgggg tacatgtcac cagtcctctt ggggttttgt acgatctgat
1261 gctggaagtt ttgattagtg atattttcta ctactacata tttagagttc actggttcag
1321 tcttaaatgc ctgcatggtg cctttttagg ataaggtata accatacatt tttggtggaa
1381 gtgtttctgg gttagggaag ttaaagtctg tttatccgta agtggggagg agggtcagct
1441 aagagaagtg ggagggccag agctttttgg ttctgattta caaattaatg aagtagtttc
1501 aaacaacgcg gtcatgttta cctctccatt tgggagcctg cctacattct tgttctagaa
1561 gcacaaaaaa tcctcagatg aattagaaga aagaggtttg gggactcagc ggatactagt
1621 tcttttacct tctgcttggt aacttagatt aaactgagca ttgtttttct gtcacaaatg
1681 ttttccttat gacactggtt tcgacatgta aaatgtgttt gaaaacctgc tttgtagatg
1741 cagagagaag ctataggaaa cccagtacca cccctggtct gttctgacga gacatcgttc
1801 ataaggcaca gcacatcgca agatgaacag ttgttaataa aagctgttgc tggaaacttg
1861 ctttaggaac agctcaagaa ccttggagtt catatttcac aaatattaat aaatataagt
1921 ccaagagctg tcagcctaat ctgtaggagc agaacctctg attgaccaaa aggcatatgg
1981 gtttaggttg gttttttgat gtcatatgtc tctgatgggg ctgcaagtgc tacctcgcgc
2041 ttgtacactg ctgctgtggg gctccgcgcc tgccggtgaa gagctgcaga tgccgagaag
2101 ccagcaaaca cagggcccac tggaaaaaaa tagttttttc attagtattt ctcgggagga
2161 cccaaaagtt aaggtcagct tgttcactgt aatttctgga agaagttcac tcagaccttc
2221 ctgaattcag atcatctcag aagtctggag ggaaatctgg cgaaaccttc gtttgaggga
2281 ctgatgtgag tgcatgtcca cctcactggt ggcaccgaga aacttacttc cttgtattaa
2341 gtgcacttct tgtatttcta ataagatgac tttccagaaa gtgagatttg ttatgttctg
2401 gcttttaaaa ggtaaaatat aaataaattt cataacttaa tctaaaaaaa aaaaaaaa
//