LOCUS BC066917 1479 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog,
yeast), mRNA (cDNA clone MGC:87126 IMAGE:4792462), complete cds.
ACCESSION BC066917
VERSION BC066917.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1479)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1479)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: b Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33149319.
FEATURES Location/Qualifiers
source 1..1479
/db_xref="H-InvDB:HIT000262338"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87126 IMAGE:4792462"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1479
/gene="UBE2D3"
/gene_synonym="E2(17)KB3"
/gene_synonym="MGC43926"
/gene_synonym="MGC5416"
/gene_synonym="UBC4/5"
/gene_synonym="UBCH5C"
/db_xref="GeneID:7323"
/db_xref="HGNC:HGNC:12476"
/db_xref="MIM:602963"
CDS 197..640
/gene="UBE2D3"
/gene_synonym="E2(17)KB3"
/gene_synonym="MGC43926"
/gene_synonym="MGC5416"
/gene_synonym="UBC4/5"
/gene_synonym="UBCH5C"
/codon_start=1
/product="ubiquitin-conjugating enzyme E2D 3 (UBC4/5
homolog, yeast)"
/protein_id="AAH66917.1"
/db_xref="GeneID:7323"
/db_xref="HGNC:HGNC:12476"
/db_xref="MIM:602963"
/translation="MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSP
YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKV
LLSICSLLCDPNPDDPLVPELARIYKTDRDKYNRISREWTQKYAM"
BASE COUNT 443 a 299 c 302 g 435 t
ORIGIN
1 ggggaggcac cagctgccgc gcggggagga ggccgaggcc gcagcttgag ggaggccccg
61 gcccctctgc gcctgtgtct ggcagagctg gtgtgagacg agacaatcct gccccgccgc
121 cgggataatc aagagttttg gccggacctt tgagcataca ccgagagagt gaggagccag
181 acgacaagca cacactatgg cgctgaaacg gattaataag gaacttagtg atttggcccg
241 tgaccctcca gcacaatgtt ctgcaggtcc agttggggat gatatgtttc attggcaagc
301 cacaattatg ggacctaatg acagcccata tcaaggcggt gtattctttt tgacaattca
361 ttttcctaca gactacccct tcaaaccacc taaggttgca tttacaacaa gaatttatca
421 tccaaatatt aacagtaatg gcagcatttg tctcgatatt ctaagatcac agtggtcgcc
481 tgctttaaca atttctaaag ttcttttatc catttgttca ctgctatgtg atccaaaccc
541 agatgacccc ctggtgccag agcttgcacg gatctataaa acagacagag ataagtacaa
601 cagaatatct cgggaatgga ctcagaagta tgccatgtga tgctacctta aagtcagaat
661 aacctgcatt atagctggaa taaactttaa attactgttc cttttttgat tttcttatcc
721 ggctgctccc ctatcagacc tcatcttttt taattttatt ttttgtttac ctccctccat
781 tcattcacat gctcatctga gaagacttaa gttcttccag ctttggacaa taactgcttt
841 tagaaactgt aaagtagtta caagagaaca gttgcccaag actcagaatt tttaaaaaaa
901 aaaatggagc atgtgtatta tgtggccaat gtcttcactc taacttggtt atgagactaa
961 aaccattcct cactgctcta acatgctgaa gaaatcatct gagggggagg gagatggatg
1021 ctcagttgtc acatcaaagg atacagcatt attctagcag catccattct tgtttaagcc
1081 ttccactgtt agagatttga ggttacatga tatgctttat gctcataact gatgtggctg
1141 gagaattggt attgaattta tagcatcagc agaacagaaa atgtgatgta ttttatgcat
1201 gtcaataaag gaatgacatg ttcttgttct acagagaatg gaaattggaa gtcaaacacc
1261 ctttgtattc caaaataggg tctaaaacat tttgtaattt tcatttaaat tgttaggagg
1321 cttggagcta ttagttaatc tatcttccaa tacactgttt aatatagcac tgaataaatg
1381 atgcaagttg tcaatggatg agtgatcaac taatagctct gctagtaatt gatttatttt
1441 tcttcaataa agttgcataa accaaaaaaa aaaaaaaaa
//