LOCUS BC066899 2303 bp mRNA linear HUM 08-FEB-2007
DEFINITION Homo sapiens transmembrane anterior posterior transformation 1,
mRNA (cDNA clone MGC:87011 IMAGE:4825556), complete cds.
ACCESSION BC066899
VERSION BC066899.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2303)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2303)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: f Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23503310.
FEATURES Location/Qualifiers
source 1..2303
/db_xref="H-InvDB:HIT000262320"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87011 IMAGE:4825556"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2303
/gene="TAPT1"
/gene_synonym="FLJ90013"
/db_xref="GeneID:202018"
/db_xref="HGNC:HGNC:26887"
CDS 20..1723
/gene="TAPT1"
/gene_synonym="FLJ90013"
/codon_start=1
/product="TAPT1 protein"
/protein_id="AAH66899.1"
/db_xref="GeneID:202018"
/db_xref="HGNC:HGNC:26887"
/translation="MAGVGDAAAPGEGGGGGVDGPQRDGRGEAEQPGGSGGQGPPPAP
QLTETLGFYESDRRRERRRGRTELSLLRFLSAELTRGYFLEHNEAKYTERRERVYTCL
RIPRELEKLMVFGIFLCLDAFLYVFTLLPLRVFLALFRLLTLPCYGLRDRRLLQPAQV
CDILKGVILVICYFMMHYVDYSMMYHLIRGQSVIKLYIIYNMLEVADRLFSSFGQDIL
DALYWTATEPKERKRAHIGVIPHFFMAVLYVFLHAILIMVQATTLNVAFNSHNKSLLT
IMMSNNFVEIKGSVFKKFEKNNLFQMSNSDIKERFTNYVLLLIVCLRNMEQFSWNPDH
LWVLFPDVCMVIASEIAVDIVKHAFITKFNDITADVYSEYRASLAFDLVSSRQKNAYT
DYSDSVARRMGFIPLPLAVLLIRVVTSSIKVQGILSYACVILFYFGLISLKVLNSIVL
LGKSCQYVKEAKMEEKLSNPPATCTPGKPSSKSQNKCKPSQGLSTEENLSASITKQPI
HQKENIIPLLVTSNSDQFLTTPDGDEKDITQDNSELKHRSSKKDLLEIDRFTICGNRI
D"
BASE COUNT 672 a 489 c 509 g 633 t
ORIGIN
1 agtttgttgt gctcggaaca tggcgggcgt cggcgacgcg gccgctccgg gagaaggcgg
61 cggtggcggc gtggacggcc cgcagcggga cggccgcggc gaggcggagc agccgggcgg
121 cagcggcgga caggggcccc cgccggcgcc tcagctcaca gagacgctgg gcttctacga
181 gagcgaccgg cggcgggaga ggcgccgggg ccgcacagag ctttcattgt tgaggttcct
241 cagtgctgaa ctaacaagag ggtacttcct tgaacataat gaggccaagt atacagaaag
301 aagagaaaga gtatacactt gtttgcgaat accaagagaa ttggaaaagc tgatggtttt
361 tggaatcttt ctgtgcctgg atgcgttttt gtatgtgttc accctgcttc ctttaagagt
421 tttcctggca ctattcaggc tcctcacttt gccttgctat ggcttaaggg acagacgttt
481 gcttcagcct gcccaggtgt gtgacatttt gaagggtgtc attttggtaa tctgctattt
541 tatgatgcac tatgttgact actccatgat gtaccacctg ataagggggc agtccgtcat
601 caagctctac atcatctaca acatgctgga ggtagctgat cgtctgtttt catcttttgg
661 acaagacata ttagatgctc tctattggac agcaacagag cctaaagaaa gaaaaagagc
721 ccacattggg gtgattcctc actttttcat ggctgttctc tatgtctttt tgcatgcaat
781 tcttataatg gttcaagcaa caactctcaa tgtagctttt aactcacaca acaagtcttt
841 gcttactatc atgatgtcta ataattttgt tgaaattaaa ggaagtgttt tcaagaagtt
901 tgaaaagaac aatctctttc aaatgtcaaa tagcgatatt aaggaacgat tcacaaatta
961 tgtgctttta ctgatagtgt gtctaagaaa catggaacag ttttcttgga atccagatca
1021 tctctgggtg ttgtttccag atgtctgtat ggtaattgca tcagaaattg ccgtggatat
1081 tgtaaaacat gcctttatta ctaaattcaa tgacattact gcagatgtct acagtgaata
1141 tagagccagt cttgcttttg accttgttag cagccgacag aaaaatgcat acactgatta
1201 cagtgactct gtagcacgga ggatgggctt tattcctctc ccactagctg ttttactcat
1261 cagagttgta acaagctcaa ttaaagtgca aggaatcctg tcttatgcct gtgtcatact
1321 cttctatttt gggttgatat ccctgaaagt acttaatagc atcgtgctgt tggggaaatc
1381 gtgccagtat gtgaaggaag ccaaaatgga agagaagctg tcgaatcctc ccgcaacctg
1441 cactccaggc aagccgtcca gtaaatcaca gaacaaatgt aaaccctctc aaggcctttc
1501 cacagaagaa aacctgtctg cctccatcac caaacaacct attcatcaaa aggaaaatat
1561 cataccatta cttgtgacaa gcaattctga tcagtttttg acaactccag atggtgacga
1621 gaaggacata acgcaggaca attctgaatt aaaacacaga tcctcaaaga aagatttgtt
1681 agagatagac aggttcacaa tttgtggaaa ccgaattgac tgaatctgtg gcttcatgcg
1741 ctgaagaagc tgggtcctgg ggcaacaagt gctgtgttgc caggacaaat agatgctaaa
1801 catggcactt aaatatttat ttaaaaactt aaattattat tggcaagcaa atcttagtat
1861 ctttcttcca gtaatatggc ctggctgagg gtcagaccac aggacaggag cgacctccgg
1921 ccttgactgt ctgggaagct tgatggatta taaaacttcc tcctgcctgg ccaagcagca
1981 gcatcatttc caggacccaa caaaggcaac atcaaaatct gttttgcttt gtcagtctgg
2041 gcttccagaa tgttgaattt gcctcaaggc ctcttcagta taaggaaata cctggaaaac
2101 tgtgaaactt ttaccacgac gtaatctttc cagtctcata ctattttcac aaacagtttt
2161 caaacgttac ttcatctgcc aaagcattaa aaaaattaaa cataagtcaa gataaatgtt
2221 cttaccacca gaataaccct taaagatgta tcttaattaa tcagaataaa aggctacctt
2281 aaataagaaa aaaaaaaaaa aaa
//