LOCUS BC066877 1362 bp mRNA linear HUM 30-MAR-2004 DEFINITION Homo sapiens cytochrome P450, family 2, subfamily D, polypeptide 6, mRNA (cDNA clone IMAGE:7002156), partial cds. ACCESSION BC066877 VERSION BC066877.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1362) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1362) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (01-MAR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Narayan Bhat cDNA Library Preparation: Bhat Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 172 Row: h Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 14110384. FEATURES Location/Qualifiers source 1..1362 /db_xref="H-InvDB:HIT000262298" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:7002156" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_195" /lab_host="DH10B" /note="Vector: pDNR-Dual" gene <1..1362 /gene="CYP2D6" /gene_synonym="CPD6" /gene_synonym="CYP2D" /gene_synonym="CYP2D@" /gene_synonym="CYP2DL1" /gene_synonym="P450-DB1" /gene_synonym="P450C2D" /db_xref="GeneID:1565" /db_xref="MIM:124030" CDS <1..1342 /gene="CYP2D6" /gene_synonym="CPD6" /gene_synonym="CYP2D" /gene_synonym="CYP2D@" /gene_synonym="CYP2DL1" /gene_synonym="P450-DB1" /gene_synonym="P450C2D" /codon_start=2 /product="CYP2D6 protein" /protein_id="AAH66877.1" /db_xref="GeneID:1565" /db_xref="MIM:124030" /translation="MGLEALVPLAVIVAIFLLLVDLMHRRQRWAARYPPGPLPLPGLG NLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRP PVPITQILGFGPRSQGRPFRPNGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQE GLKEESGFLREVLNAVPVLLHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPR DLTEAFLAEMEKAKGNPESSFNDENLCIVVADLFSAGMVTTSTTLAWGLLLMILHPDV QRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQ GFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRAC LGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVTPSPYELCAVPR" misc_feature 173..1330 /gene="CYP2D6" /gene_synonym="CPD6" /gene_synonym="CYP2D" /gene_synonym="CYP2D@" /gene_synonym="CYP2DL1" /gene_synonym="P450-DB1" /gene_synonym="P450C2D" /note="p450; Region: Cytochrome P450. Cytochrome P450s are involved in the oxidative degradation of various compounds. Particularly well known for their role in the degradation of environmental toxins and mutagens. Structure is mostly alpha, and binds a heme cofactor" /db_xref="CDD:pfam00067" BASE COUNT 234 a 463 c 398 g 267 t ORIGIN 1 tatggggcta gaagcactgg tgcccctggc cgtgatagtg gccatcttcc tgctcctggt 61 ggacctgatg caccggcgcc aacgctgggc tgcacgctac ccaccaggcc ccctgccact 121 gcccgggctg ggcaacctgc tgcatgtgga cttccagaac acaccatact gcttcgacca 181 gttgcggcgc cgcttcgggg acgtgttcag cctgcagctg gcctggacgc cggtggtcgt 241 gctcaatggg ctggcggccg tgcgcgaggc gctggtgacc cacggcgagg acaccgccga 301 ccgcccgcct gtgcccatca cccagatcct gggtttcggg ccgcgttccc aaggacgccc 361 ctttcgcccc aacggtctct tggacaaagc cgtgagcaac gtgatcgcct ccctcacctg 421 cgggcgccgc ttcgagtacg acgaccctcg cttcctcagg ctgctggacc tagctcagga 481 gggactgaag gaggagtcgg gctttctgcg cgaggtgctg aatgctgtcc ccgtcctcct 541 gcatatccca gcgctggctg gcaaggtcct acgcttccaa aaggctttcc tgacccagct 601 ggatgagctg ctaactgagc acaggatgac ctgggaccca gcccagcccc cccgagacct 661 gactgaggcc ttcctggcag agatggagaa ggccaagggg aaccctgaga gcagcttcaa 721 tgatgagaac ctgtgcatag tggtggctga cctgttctct gccgggatgg tgaccacctc 781 gaccacgctg gcctggggcc tcctgctcat gatcctacat ccggatgtgc agcgccgtgt 841 ccaacaggag atcgacgacg tgatagggca ggtgcggcga ccagagatgg gtgaccaggc 901 tcacatgccc tacaccactg ccgtgattca tgaggtgcag cgctttgggg acatcgtccc 961 cctgggtgtg acccatatga catcccgtga catcgaagta cagggcttcc gcatccctaa 1021 gggaacgaca ctcatcacca acctgtcatc ggtgctgaag gatgaggccg tctgggagaa 1081 gcccttccgc ttccaccccg aacacttcct ggatgcccag ggccactttg tgaagccgga 1141 ggccttcctg cctttctcag caggccgccg tgcatgcctc ggggagcccc tggcccgcat 1201 ggagctcttc ctcttcttca cctccctgct gcagcacttc agcttctcgg tgcccactgg 1261 acagccccgg cccagccacc atggtgtctt tgctttcctg gtgaccccat ccccctatga 1321 gctttgtgct gtgccccgct agaaaggggt acctagtccc ca //