LOCUS BC066654 1525 bp mRNA linear HUM 06-MAR-2007 DEFINITION Homo sapiens jumonji domain containing 6, mRNA (cDNA clone MGC:70447 IMAGE:6064429), complete cds. ACCESSION BC066654 VERSION BC066654.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1525) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1525) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 140 Row: f Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 23943859. FEATURES Location/Qualifiers source 1..1525 /db_xref="H-InvDB:HIT000262287" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:70447 IMAGE:6064429" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1525 /gene="JMJD6" /gene_synonym="PSR" /gene_synonym="PTDSR1" /db_xref="GeneID:23210" /db_xref="HGNC:HGNC:19355" /db_xref="MIM:604914" CDS 7..1218 /gene="JMJD6" /gene_synonym="PSR" /gene_synonym="PTDSR1" /codon_start=1 /product="jumonji domain containing 6" /protein_id="AAH66654.1" /db_xref="GeneID:23210" /db_xref="HGNC:HGNC:19355" /db_xref="MIM:604914" /translation="MNHKSKKRIREAKRSARPELKDSLDWTRHNYYESFSLSPAAVAD NVERADALQLSVEEFVERYERPYKPVVLLNAQEGWSAQEKWTLERLKRKYRNQKFKCG EDNDGYSVKMKMKYYIEYMESTRDDSPLYIFDSSYGEHPKRRKLLEDYKVPKFFTDDL FQYAGEKRRPPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELI KVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVL NLDTTIAITQNFASSTNFPVVWHKTVRGRPKLSRKWYRILKQEHPELAVLADSVDLQE STGIASDSSSDSSSSSSSSSSDSDSECESGSEGDGTVHRRKKRRTCSMVGNGDTTSQD DCVSKERSSSR" BASE COUNT 437 a 374 c 415 g 299 t ORIGIN 1 cgcagaatga accacaagag caagaagcgc atccgcgagg ccaagcggag tgcgcggccg 61 gagctcaagg actcgctgga ttggacccgg cacaactact acgagagctt ctcgctgagc 121 ccggcggccg tggcggataa cgtggaaagg gcagatgctt tacagctgtc tgtggaagaa 181 tttgtggagc ggtatgaaag accttacaag cccgtggttt tgttgaatgc gcaagagggc 241 tggtctgcgc aggagaaatg gactctggag cgcctaaaaa ggaaatatcg gaaccagaag 301 ttcaagtgtg gtgaggataa cgatggctac tcagtgaaga tgaagatgaa atactacatc 361 gagtacatgg agagcactcg agatgatagt cccctttaca tctttgacag cagctatggt 421 gaacacccta aaagaaggaa acttttggaa gactacaagg tgccaaagtt tttcactgat 481 gaccttttcc agtatgctgg ggagaagcgc aggccccctt acaggtggtt tgtgatgggg 541 ccaccacgct ccggaactgg gattcacatc gaccctctgg gaaccagtgc ctggaatgcc 601 ttagttcagg gccacaagcg ctggtgcctg tttcctacca gcactcccag ggaactcatc 661 aaagtgaccc gagacgaagg agggaaccag caagacgaag ctattacctg gtttaatgtt 721 atttatcccc ggacacagct tccaacctgg ccacctgaat tcaaacccct ggaaatctta 781 caaaaaccag gagagactgt ctttgtacca ggaggctggt ggcatgttgt cctcaatctc 841 gacactacta tcgccatcac ccaaaatttt gccagcagca ccaacttccc tgtggtatgg 901 cacaagacgg taagagggag accaaagtta tcaaggaaat ggtataggat tttgaagcaa 961 gagcaccccg agttggcagt cctcgcagac tcggttgacc ttcaggagtc cacagggata 1021 gcttccgaca gctccagcga ctcttccagc tcctccagct ccagttcgtc agactccgac 1081 tcagagtgcg agtctggatc cgagggcgat gggacagtgc accgcaggaa gaagaggagg 1141 acgtgcagca tggtgggaaa cggggacacc acctcccagg acgactgtgt cagcaaagag 1201 cgcagctcct ccaggtgacc cagcaaggct gttgtctgta tggaaggaca cgctcgcggc 1261 aagggcaggg cctggggagg gtggcctgtc cagtcctgca gacaagggga ggcctgacag 1321 agcccaagaa tgaggacacc ctcggcacgg gaacccattc acttagcgtt tgctccagta 1381 gctttccctc tgctaccaat gcagataaac gcggcttgtt ttactcaggc aagagaatgt 1441 gaatagtgcc aagaaaatcc tttacattat ttaataaaaa ttgaatccat aaaaaaaaaa 1501 aaaaaaaaaa aaaaaaaaaa aaaaa //