LOCUS BC066643 5005 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CASK interacting protein 2, mRNA (cDNA clone MGC:70409
IMAGE:5576059), complete cds.
ACCESSION BC066643
VERSION BC066643.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5005)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5005)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: d Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45433546.
FEATURES Location/Qualifiers
source 1..5005
/db_xref="H-InvDB:HIT000262276"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:70409 IMAGE:5576059"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..5005
/gene="CASKIN2"
/gene_synonym="ANKS5B"
/gene_synonym="FLJ21609"
/gene_synonym="KIAA1139"
/db_xref="GeneID:57513"
/db_xref="HGNC:HGNC:18200"
CDS 551..4159
/gene="CASKIN2"
/gene_synonym="ANKS5B"
/gene_synonym="FLJ21609"
/gene_synonym="KIAA1139"
/codon_start=1
/product="CASK interacting protein 2"
/protein_id="AAH66643.1"
/db_xref="GeneID:57513"
/db_xref="HGNC:HGNC:18200"
/translation="MGREQDLILAVKNGDVTGVQKLVAKVKATKTKLLGSTKRLNVNY
QDADGFSALHHAALGGSLELIALLLEAQATVDIKDSNGMRPLHYAAWQGRLEPVRLLL
RASAAVNAASLDGQIPLHLAAQYGHYEVSEMLLQHQSNPCLVNKAKKTPLDLACEFGR
LKVAQLLLNSHLCVALLEGEAKDPCDPNYTTPLHLAAKNGHREVIRQLLRAGIEINRQ
TKTGTALHEAALYGKTEVVRLLLEGGVDVNIRNTYNQTALDIVNQFTTSQASREIKQL
LREASGILKVRALKDFWNLHDPTALNVRAGDVITVLEQHPDGRWKGHIHESQRGTDRI
GYFPPGIVEVVSKRVGIPAARLPSAPTPLRPGFSRTPQPPAEEPPHPLTYSQLPRVGL
SPDSPAGDRNSVGSEGSVGSIRSAGSGQSSEGTNGHGPGLLIENAQPLPSAGEDQVLP
GLHPPSLADNLSHRPLANCRSGEQIFTQDVRPEQLLEGKDAQAIHNWLSEFQLEGYTA
HFLQAGYDVPTISRMTPEDLTAIGVTKPGHRKKIASEIAQLSIAEWLPSYIPTDLLEW
LCALGLPQYHKQLVSSGYDSMGLVADLTWEELQEIGVNKLGHQKKLMLGVKRLAELRR
GLLQGEALSEGGRRLAKGPELMAIEGLENGEGPATAGPRLLTFQGSELSPELQAAMAG
GGPEPLPLPPARSPSQESIGARSRGSGHSQEQPAPQPSGGDPSPPQERNLPEGTERPP
KLCSSLPGQGPPPYVFMYPQGSPSSPAPGPPPGAPWAFSYLAGPPATPPDPPRPKRRS
HSLSRPGPTEGDAEGEAEGPVGSTLGSYATLTRRPGRSALVRTSPSVTPTPARGTPRS
QSFALRARRKGPPPPPPKRLSSVSGPSPEPPPLDGSPGPKEGATGPRRRTLSEPAGPS
EPPGPPAPAGPASDTEEEEPGPEGTPPSRGSSGEGLPFAEEGNLTIKQRPKPAGPPPR
ETPVPPGLDFNLTESDTVKRRPKCREREPLQTALLAFGVASATPGPAAPLPSPTPGES
PPASSLPQPEPSSLPAQGVPTPLAPSPAMQPPVPPCPGPGLESSAASRWNGETEPPAA
PAALLKVPGAGTAPKPVSVACTQLAFSGPKLAPRLGPRPVPPPRPESTGTVGPGQAQQ
RLEQTSSSLAAALRAAEKSIGTKEQEGTPSASTKHILDDISTMFDALADQLDAMLD"
BASE COUNT 1015 a 1699 c 1509 g 782 t
ORIGIN
1 gggaggggcg ggatttcctg cgggaggcgc cgagccggcc ttggaaaagg agaaggagaa
61 aggggggcag gggggagtgg gagccaccgt cctgagtgcc agggaccgag cagggccagc
121 cggaccccgg cgggcggccg ggagagagcc ctgagaccag tgcaccgctg ctgcctgagg
181 cccaagggaa tgctggctgc tctctgggtg ggcactggtg ttccacagcc aagccgggaa
241 gattggtgtg cccagtccca gcccatcctg gagctgtcgg aagccacaag ctgatatcca
301 tccagatttc catgtagcct tcaccccctc aaagattagc tttccttcgt gtggtggcag
361 ttcacggagc acctttggga gtatccctca gtacctgacg aggagcccac tgcctgggac
421 accagacttg ctcccccgga accgggagcc ctccaagggg ctgtggcatg gcgccctgac
481 gccccagctt ggacccgttg cctgcctttg ccctggactc ctgagtgtag agctcagccc
541 aggagccagt atgggtcgtg aacaggacct gatcctcgcc gtcaagaatg gagatgtgac
601 cggtgtgcag aaactggtgg cgaaggtcaa ggccacaaag acaaagctcc tgggctccac
661 aaagaggctc aacgtgaact accaggatgc tgatggattc tctgccctcc accacgctgc
721 tttggggggc agcctggagc tcatagcctt gctgctagag gctcaggcca ctgttgacat
781 caaggacagc aatggcatgc gcccgctgca ctacgcagcc tggcagggcc ggctggagcc
841 tgtgaggctg ctgctgcgcg cctctgcggc tgtcaatgcc gcctcgctgg acggacagat
901 ccccctgcac ctggctgcac agtatggaca ttatgaggtg tcagaaatgc tcctccagca
961 tcagtccaac ccatgcctgg tcaacaaggc caagaagacg cccctggacc tggcctgtga
1021 atttggccga ctcaaggtgg cccagctgct tctgaacagc cacttatgtg tggcactgct
1081 ggagggtgag gccaaagacc cgtgtgaccc caactacacc acgcccctgc acttggctgc
1141 caagaatggc cacagagaag tcatcaggca gctcctgaga gctgggatcg agatcaaccg
1201 ccagaccaag acgggtacgg cgctccacga ggccgcactg tatggcaaga ccgaggtggt
1261 gcggctgctt ctggagggag gtgtggacgt gaacatccgg aatacgtata accagacggc
1321 gctggacata gtgaatcagt tcaccacctc ccaggccagc cgggaaatca agcagctact
1381 gcgggaggcc tcagggatcc tgaaggtccg agcgctcaag gatttctgga acctccacga
1441 tcccactgct ctcaatgtcc gggcagggga tgtcatcacg gtgctagaac agcatcccga
1501 cggccgctgg aagggccaca tccacgagag ccagaggggc acagaccgca taggctactt
1561 ccccccgggc attgtcgagg tggtcagcaa gcgggtgggc atccctgcag cccgcctccc
1621 ctccgcaccc acccccctgc gcccaggctt ctcccggaca ccgcagcctc ctgccgaaga
1681 acccccgcac cctcttacct acagccagct tcctcgggtg ggcctcagcc cagacagccc
1741 agcaggtgac aggaatagtg tgggcagtga gggcagcgtg ggcagcatcc gcagtgccgg
1801 cagcgggcag agctctgagg gcactaatgg ccatggccct ggcctcctga ttgagaacgc
1861 ccagccactg ccctctgctg gagaggacca ggtgctgcca ggactccacc cgccgtccct
1921 ggcagacaac ctgagccacc gccctctggc caactgccgc tctggggagc agatcttcac
1981 ccaggacgtg cggccagaac agctgctgga ggggaaggac gcgcaggcca ttcataactg
2041 gctaagcgag ttccagctgg agggctacac tgcccacttt ctgcaggccg gctatgatgt
2101 gcctaccatc agccgcatga cacctgagga cctgacggcc atcggggtga ccaagcctgg
2161 gcacaggaag aagatcgcct cagagatcgc tcagctcagc atcgccgagt ggctgcccag
2221 ctacatccca acggacctgc tggagtggct gtgtgcactg gggctgccac agtaccacaa
2281 gcagctggtg agcagcggct acgactccat ggggctggtg gccgacctca cctgggagga
2341 gctgcaggag attggggtca acaagctcgg gcatcagaag aagctcatgc tgggggtgaa
2401 gcggctggcg gagcttcggc ggggcctgct gcagggggag gccctcagcg aaggcgggcg
2461 ccggctggcc aagggtccgg agctgatggc catcgaggga ctggagaacg gagaaggccc
2521 agctacagct ggcccacggc tcctcacctt ccagggcagc gaactaagcc cagagctaca
2581 ggcggccatg gcagggggtg gccctgaacc actccccctc ccacctgccc gctctcccag
2641 ccaggagagc atcggggcac gctcacgggg gtctggccac tcacaggaac agcctgcccc
2701 acagcccagc ggtggagatc ccagcccccc ccaggagagg aacctcccag agggcacaga
2761 gcggccccct aagctttgtt cttcacttcc tggccaagga cccccaccct atgtttttat
2821 gtacccccag ggctcaccct ctagcccggc cccagggcca cctcctggcg caccctgggc
2881 cttctcctac ttggccgggc cccctgccac tcccccagac ccgcctcgac ctaagcgccg
2941 gtcccacagc ctaagccgcc ctggccccac agagggggat gctgaggggg aggccgaagg
3001 gccagtgggc agcaccctag gcagttatgc tacccttacc cggcggccag gacgcagtgc
3061 ccttgtccgg accagtccta gcgtgacccc aaccccagct cgggggactc ctcgcagcca
3121 gtcctttgcc ctgcgggccc ggcgcaaagg ccccccgccc ccgcccccca agcgcctcag
3181 ctccgtctct ggccccagcc cggagccacc tccactagat gggagcccag ggcccaagga
3241 aggggccaca gggccccgaa ggcgaacact gagtgaacct gctggcccct cagagccccc
3301 tggcccacct gccccggctg ggcccgcgtc agacacggag gaggaggagc caggccctga
3361 ggggacgccc ccatctcggg gcagctctgg ggaagggctg ccgtttgcag aggaagggaa
3421 cctgaccatc aaacagcgcc cgaagcccgc tggccccccg ccccgagaga cacccgtgcc
3481 ccccggcctc gatttcaacc tcacggaatc agacactgtt aagcggaggc ccaagtgccg
3541 ggagagagag ccactgcaga ccgcactgct ggccttcgga gtggccagtg ccacgcctgg
3601 ccccgctgcc ccactgcctt ccccaactcc tggcgagtct cctccagctt ctagccttcc
3661 ccagcccgag cccagcagcc ttccagccca aggagttcca accccccttg ctcccagccc
3721 cgccatgcag cctccagtgc cgccctgccc agggccaggt ctggaaagct cagcagctag
3781 tcggtggaat ggggagacag aacccccggc cgcccctgct gccctcctca aggtgcccgg
3841 agcaggaaca gcccccaagc ctgtgtcggt ggcctgcacc cagctggcat tttctggccc
3901 taagctagcg ccccggctcg gcccccgccc agtgcctcct ccacggcctg agagcactgg
3961 gactgtgggc ccaggccagg cccagcagag actggagcag accagctcgt ccctggcagc
4021 tgcactgaga gccgcagaga agagcattgg caccaaggag caagagggca cccccagcgc
4081 ctccaccaag cacattctgg atgacatcag caccatgttc gacgccctgg ctgaccagct
4141 ggacgccatg ctggactgag ccctccagca gtgcccactg tgacctgccg aagtccactg
4201 cctttgcccc agcacagaag aggcccctgc caccctaggg acgggccaag ggctggtcag
4261 gctgaagtgc ccctcctagc agggcccctt cccactcagc ccgcggctgt gggcaccaca
4321 gctcttgtgg ggcagcccac cttagaacct gactagcgag ggacctccgc tgcatctcag
4381 caaagcccct cccagggttt gatcgattga gcaggacagc cctgctcctg gacagggacc
4441 ctggtaagag ctctctcctc agggaggaag taggggtggg gctttggggg tgctttctct
4501 gtacccccca gcccatgtcc caagttgtgc caagggaatg cctcttgcca cccaccatcc
4561 tgcccaggcc ctgagaggct ggaggaggcg tgtgtctggc cgggccccct ctccgtaggt
4621 gtacagagga catgtaaata cacagcggtg gtgcccaggc agctcctgcc cccgccttcc
4681 ctcactgagg cagggctagc aggggtggga ggcagtgggg ttaacagatc ccacaagtcc
4741 taacttttca attgtaaatg ttattttcta agcagagaga aatgcatata ttttaaatgg
4801 aatttattct atcaactgcc tgagaggaca caatggggga ggggcttcgg accacagcag
4861 gagccccgac tgcccacctg agggcaggga gagcctgacc ccattggccc aggccctggc
4921 tctgtaacca ttaacctctt cccccaacta acaccaatga aaacaccatt ccacgtgaaa
4981 aaaaaaaaaa aaaaaaaaaa aaaaa
//