LOCUS BC066597 4782 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens copine III, mRNA (cDNA clone MGC:75165 IMAGE:6168840),
complete cds.
ACCESSION BC066597
VERSION BC066597.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4782)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4782)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-FEB-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: o Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41872597.
FEATURES Location/Qualifiers
source 1..4782
/db_xref="H-InvDB:HIT000262271"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:75165 IMAGE:6168840"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4782
/gene="CPNE3"
/gene_synonym="CPN3"
/gene_synonym="KIAA0636"
/gene_synonym="PRO1071"
/db_xref="GeneID:8895"
/db_xref="HGNC:HGNC:2316"
/db_xref="MIM:604207"
CDS 135..1748
/gene="CPNE3"
/gene_synonym="CPN3"
/gene_synonym="KIAA0636"
/gene_synonym="PRO1071"
/codon_start=1
/product="copine III"
/protein_id="AAH66597.1"
/db_xref="GeneID:8895"
/db_xref="HGNC:HGNC:2316"
/db_xref="MIM:604207"
/translation="MAAQCVTKVALNVSCANLLDKDIGSKSDPLCVLFLNTSGQQWYE
VERTERIKNCLNPQFSKTFIIDYYFEVVQKLKFGVYDIDNKTIELSDDDFLGECECTL
GQIVSSKKLTRPLVMKTGRPAGKGSITISAEEIKDNRVVLFEMEARKLDNKDLFGKSD
PYLEFHKQTSDGNWLMVHRTEVVKNNLNPVWRPFKISLNSLCYGDMDKTIKVECYDYD
NDGSHDLIGTFQTTMTKLKEASRSSPVEFECINEKKRQKKKSYKNSGVISVKQCEITV
ECTFLDYIMGGCQLNFTVGVDFTGSNGDPRSPDSLHYISPNGVNEYLTALWSVGLVIQ
DYDADKMFPAFGFGAQIPPQWQVSHEFPMNFNPSNPYCNGIQGIVEAYRSCLPQIKLY
GPTNFSPIINHVARFAAAATQQQTASQYFVLLIITDGVITDLDETRQAIVNASRLPMS
IIIVGVGGADFSAMEFLDGDGGSLRSPLGEVAIRDIVQFVPFRQFQNAPKEALAQCVL
AEIPQQVVGYFNTYKLLPPKNPATKQQKQ"
BASE COUNT 1416 a 901 c 914 g 1551 t
ORIGIN
1 cctgaatccc tgcggtccca gcgtcgctcc ggacgctgcc aacctgttct ccaccgtcgc
61 tcgacttcca cctctaagac tcccacgaaa ctcaggttga ataattcatc aaattacaca
121 actgaactca agacatggct gcccagtgtg tcacaaaggt ggcgctgaat gtttcctgtg
181 ccaatctttt ggataaagat atagggtcaa agtcagaccc tttatgtgtg ttgtttttga
241 atacaagtgg tcaacagtgg tatgaggttg agcgcacaga aaggattaag aattgcttga
301 atccccaatt ttccaagaca tttattattg attactactt tgaagtggtt cagaaattga
361 aatttggggt ttatgacatc gacaacaaaa ctattgagct gagtgatgat gacttcttag
421 gggaatgtga atgtaccctt ggacaaattg tttccagcaa gaagctaact cgaccactgg
481 tgatgaaaac tggcagacct gcaggaaaag ggagcattac gatttcagct gaagaaataa
541 aagataatag agtggtcttg tttgaaatgg aagccagaaa actggataat aaggatctat
601 ttggaaagtc agacccatac ctggaattcc acaagcagac atctgatgga aactggctaa
661 tggttcatcg gacagaggtt gttaaaaaca acttgaatcc tgtttggagg cctttcaaga
721 tctctcttaa ctcactgtgt tacggagata tggacaaaac cattaaggtg gagtgttatg
781 attatgacaa tgatgggtca catgatctca ttggaacatt tcagaccacc atgacaaaac
841 tgaaagaagc ctccagaagc tcacctgttg aatttgaatg cataaatgag aaaaaaaggc
901 aaaagaaaaa aagctacaag aattcaggtg ttatcagtgt gaaacagtgt gagattacag
961 tagaatgcac attccttgac tatataatgg gaggatgtca gctgaatttt actgtgggag
1021 tggacttcac tggctccaat ggtgacccaa ggtctccaga ctcccttcat tacatcagcc
1081 ccaatggcgt taatgagtat ttgactgctc tctggtctgt gggactggtc attcaagatt
1141 atgatgctga taagatgttt ccagcttttg gttttggcgc tcagatacct cctcagtggc
1201 aggtatcaca tgaatttcca atgaacttca acccatccaa tccctactgc aatggaatcc
1261 aaggcattgt agaggcgtat cggtcttgtc ttcctcagat aaaactctat ggaccaacta
1321 atttttctcc aatcataaat cacgtggcca ggtttgctgc tgcagccacg caacagcaga
1381 cagcttctca atattttgtg cttttgatta ttactgatgg tgtgatcaca gaccttgatg
1441 aaaccagaca agctatagtt aatgcctcca ggctgcctat gtccatcata attgttggag
1501 ttggaggtgc tgacttcagc gccatggagt ttctggatgg tgatggtgga agtctccgct
1561 ccccattggg cgaagtggcc atcagagata ttgtccagtt tgtgcctttc agacagttcc
1621 agaatgctcc aaaagaagca cttgctcagt gtgtcttggc agagattccc cagcaggtgg
1681 tgggctactt caatacatac aaactccttc ctcccaagaa cccagccacg aaacaacaga
1741 agcagtgacc acttcaacag aattcttttg tgttctgtgg agcaatgcca tctctcaccc
1801 caaatcgtgt atctgtcatt ctacgtactt tttaccctca gcatttatga tgtaaatctc
1861 tttctctatg gattatatct gtttaaagca ttctttctag gttattttgg ggggacagtg
1921 ccaagtccat ctttgcccag tcaattcagt gattgatagc aatttacatt aattgcagta
1981 aagctctttg gattagaaat tagtgtgggg aaagcttatt ctgttgttgt ttttgtttac
2041 tttcatatga tgaaaatgct gtgtttaagt gtttgtcaat aggaagaatg gaaaactgtt
2101 gggatgatgt ggtttgcagg ttgctgtgcc tgattcacag tgtatgttgt ataagccagt
2161 gtccatacct gattatgaga gcttcttaaa ttatatgata tcaaatttgt tcctgtaact
2221 ctgtatacag tgcttttctg caaggtaaaa ataacctgtc tatgcatctg atttttgcta
2281 cagtttagac actgtggttt acaaaacagc atgcactcaa cttgggactt tatgaaaagt
2341 actgaatgag caggaaaagg cacatactca gttttttaaa tgtacaatca acaagtaaaa
2401 ataacctcat gtaagtaagc catttttatt tgcctttcta gatattttat tttattgtgg
2461 aaaactgtaa acatggtcag atttggcttt ttttttcatt aactgagcaa gactttcagg
2521 atattgtaga tgcacagatg gtaggttgtc ctgaattcta cattattaga ttactttaat
2581 tgagatttgt taaaacggtt aggactgttt tgtccaggaa agataagagg accaaacata
2641 taaggtgaaa ttcagaattc cgtttccttc taactaatga aaaactgctt actaaaaaaa
2701 aattttatac tttccttgct aaggtcccat atattgattt gtacagatcc acttagtcat
2761 tttctccttt ttttaagaac cattttcatc tgatttttaa actcacgata ccagttatct
2821 gttaatcaaa attgcatttt acaatttaat aatgtgatat ttcctatgtc tacagcatac
2881 cttattaggt ataaaaccta ctgcaactta gaaaaaggaa agaaaaaaga aaacttttcc
2941 aactgctgca ttaagatagg gtggatttta tgtgcttttt ttttaagagt tgaatttctt
3001 ttcctgactt ttacctttta cagcgtatta cttagtgaac attacatttt cagaatagat
3061 cctaatattt tattgagggc ctatgtgcta aaaactatgc atatctatat attggccaat
3121 tatctttaat aatttacctt ttgaaattgc atgtttatca tatatcctta agtggacaca
3181 tacagtgcca tgttgatgtg cctctcagtt ttattgaaaa gctgccccac agcccatgtc
3241 tcttgttctc tgcaatgcct caagggagtg agctctcaac cacagatagc tgtggcttct
3301 cagaagcagc tcattgccaa ggccaggctg agaggggacc tgcttgctgt ggtggttgcc
3361 tagcccagat gagcatttac ctaccacctt cccacttggc tagctgtcct ttggatatgt
3421 gctgttaact ggggaaggca tctaactagt agcctgctac tccatagtat ggctcaatag
3481 atgacacatc attttgacat tatcaatagg agaaaagaaa actaaccctt cttctgattg
3541 tttggagcca tagttgtctc agatgttcta attctctttg tatgcttgga aacagcatag
3601 atatgttgct gtggttttca gaattttctc ttttaatcac aagaagcctt ttaaaaaatg
3661 acttacacat attctcaatg tacagtaaaa cagacagaag tgagcttatc tgtttgatgc
3721 tgtggcaggg tcccagtcac tgggcatatc ctccttctcc ttaaccagct cctcagcagc
3781 ccctgagtca cctgcacaag gtgcttggga actgctggtt atgagcattc ctggttttct
3841 tcagccaaat aacaggtaat cactgtcaat tggatttggt cttcattatt ttatattctg
3901 attttatcag aattattcta ttttaaaatt gttttaaaat ttaaaaacat ttaattcatg
3961 atcatgttca tcagtagatg ctattattca taagaactgt gattccagca aactagggta
4021 attggtgcct ttttacagtt ttgaataaaa gcatttacaa tttctaaatt atcagttttc
4081 acagtttcag cactcaacct catcatacgc tgatttaata ttgttttaca ttaaaatagt
4141 ccttttccct gttgtgccac cattcattta agtgctgttt gttcttaaaa tgcatttaaa
4201 gaaaaattac ccatattgac tttcacacct catataatca gatctattac aaatatatat
4261 cggagtgacg gtgcccagga tagatgtaat atttcttaca gatgctggca cagaggaaat
4321 aatataccag ctaatctagt cacctaacct tgtggttaga attgcaattt taagaccaga
4381 aaaatttgaa gtctgatcag agatttacaa ctgttcatta tagtggtgcc ttaggcaatc
4441 tttccaaagt aaattcaggg ccccattgct acttatgcca tatttggaca tacttttttt
4501 ttcttcaatt ttgtaaactt cctggaaagc tgtcttcact aagtatcccc tagtctctat
4561 atatgtggtt agtagtcatg gaaatgacac ataaagtacg ccagaagttt gatggaacgt
4621 gttagaaact gttttgtgct tttatggatg tcatacttga caatacatgt gtaagttact
4681 aatatatgaa ttgatgctaa atatatctta catttgaatt ccttttggat aaagttattt
4741 cttgatgtga aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//