LOCUS BC066354 993 bp mRNA linear HUM 30-JUN-2006
DEFINITION Homo sapiens chromosome 20 open reading frame 71, mRNA (cDNA clone
MGC:87618 IMAGE:4826101), complete cds.
ACCESSION BC066354
VERSION BC066354.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 993)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 993)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-FEB-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: g Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62526038.
FEATURES Location/Qualifiers
source 1..993
/db_xref="H-InvDB:HIT000262245"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87618 IMAGE:4826101"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..993
/gene="C20orf71"
/gene_synonym="SPLUNC3"
/db_xref="GeneID:128861"
/db_xref="HGNC:HGNC:16204"
CDS 186..842
/gene="C20orf71"
/gene_synonym="SPLUNC3"
/codon_start=1
/product="chromosome 20 open reading frame 71"
/protein_id="AAH66354.1"
/db_xref="GeneID:128861"
/db_xref="HGNC:HGNC:16204"
/translation="MMCPLWRLLIFLGLLALPLAPHKQPWPGLAQAHRDNKSTLARII
AQGLIKHNAESRIQNIHFGDRLNASAQVAPGLVGWLISGRKHQQQQESRSFDNNIVKM
CAHMSIVVEFWLEKDEFGRRDLVIGKCDAEPSSVHVAILTEAIPPKMNQFLYNLKENL
QKVLPHMVESQVCPLIGEILGQLDVKLLKSLIEQEAAHEPTHHETSQPSACQAGESPS
"
BASE COUNT 271 a 288 c 233 g 201 t
ORIGIN
1 aatgtgagca agccctggtg gcagcgccag ggtccagtgc agcccctccc cacagcatgc
61 tgggggctaa ttctgatgtc atctttctgc agaaaaccat tagaccatcc ctccagactg
121 ccaccctcaa agccgtctgc ccaggcccca tctgacactc ttgacatctg caggtcccag
181 accctatgat gtgtccactc tggaggctcc tcatcttcct cgggttgctg gccttgccct
241 tggcaccaca caagcagcct tggcctggcc tggcccaagc ccacagagac aacaaatcca
301 ccctggcaag aattattgct cagggcctca taaagcacaa cgcagaaagc cgaattcaga
361 acatccactt tggggacaga ctgaatgcct cagcacaagt ggccccaggg ctggtgggct
421 ggctaatcag cggcaggaaa caccagcagc agcaagagag caggtccttc gataacaaca
481 tcgtaaagat gtgtgcacat atgagcatcg ttgtggagtt ctggctggag aaagacgagt
541 ttggccggag ggatctggtg ataggcaaat gcgatgcaga gcccagcagt gtccatgtgg
601 ccatcctcac tgaggctatc ccaccaaaga tgaatcagtt tctctacaac ctcaaagaga
661 atctgcaaaa agttctccca cacatggtag aaagtcaggt atgtcctctg atcggtgaaa
721 tcctcgggca gctggatgtg aaactgttga aaagcctcat agaacaggag gctgctcatg
781 aaccaaccca ccatgaaacc agccaaccct ctgcatgcca ggctggagag tcccccagct
841 gacttctgct gatcagaagg aaagtccaca tcttgcaacc ttaagtctcc cttagagtgg
901 ggcttctgct accctaaaaa ctttacccca ggctctgtgg acataccatc ctctcctaca
961 ataaactcta gctctggaaa aaaaaaaaaa aaa
//