LOCUS BC066336 1278 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) 26S subunit,
non-ATPase, 14, mRNA (cDNA clone MGC:87397 IMAGE:5296432), complete
cds.
ACCESSION BC066336
VERSION BC066336.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1278)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1278)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-FEB-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: d Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42734423.
FEATURES Location/Qualifiers
source 1..1278
/db_xref="H-InvDB:HIT000262227"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87397 IMAGE:5296432"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1278
/gene="PSMD14"
/gene_synonym="PAD1"
/gene_synonym="POH1"
/gene_synonym="rpn11"
/db_xref="GeneID:10213"
/db_xref="HGNC:HGNC:16889"
/db_xref="MIM:607173"
CDS 314..1246
/gene="PSMD14"
/gene_synonym="PAD1"
/gene_synonym="POH1"
/gene_synonym="rpn11"
/codon_start=1
/product="proteasome (prosome, macropain) 26S subunit,
non-ATPase, 14"
/protein_id="AAH66336.1"
/db_xref="GeneID:10213"
/db_xref="HGNC:HGNC:16889"
/db_xref="MIM:607173"
/translation="MDRLLRLGGGMPGLGQGPPTDAPAVDTAEQVYISSLALLKMLKH
GRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQT
GRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAF
RLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLL
NLHKKSWMEGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKMTPEQLAIKNVG
KQDPKRHLEEHVDVLMTSNIVQCLAAMLDTVVFK"
BASE COUNT 388 a 236 c 327 g 327 t
ORIGIN
1 gcttcgcggc ggaggcccgg gcaactcttt tgaatggaat cgggctgatt catcgccggt
61 ttgcagacag agccgcgtcg ggtgtgcgcc gctgctgctg ttgcctctgt cttcgcgtca
121 ccacagaggc aagacaaggg tccatatcgc ggcatccggc tcccgcccgt cttcaggaga
181 gaaagaaaaa ataaaatata cttggggaag ttgtacctgc cagaattagc aagagctttc
241 tttaagaaga catttgtcaa actcaacaaa ttgaaggtta acaccttaag agttgtagtt
301 actgaccaga aatatggaca gacttcttag acttggagga ggtatgcctg gactgggcca
361 ggggccacct acagatgctc ctgcagtgga cacagcagaa caagtctata tctcttccct
421 ggcactgtta aaaatgttaa aacatggccg tgctggagtt ccaatggaag ttatgggttt
481 gatgcttgga gaatttgttg atgattatac cgtcagagtg attgatgtgt ttgctatgcc
541 acagtcagga acaggtgtca gtgtggaggc agttgatcca gtgttccaag ctaaaatgtt
601 ggatatgttg aagcagacag gaaggccgga gatggttgtt ggttggtatc acagtcaccc
661 tggctttggt tgttggcttt ctggtgtgga tatcaacact cagcagagct ttgaagcctt
721 gtcggagaga gctgtggcag tggttgtgga tcccattcag agtgtaaaag gaaaggttgt
781 tattgatgcc ttcagattga tcaatgctaa tatgatggtc ttaggacatg aaccaagaca
841 aacaacttcg aatctgggtc acttaaacaa gccatctatc caggcattaa ttcatggact
901 aaacagacat tattactcca ttactattaa ctatcggaaa aatgaactgg aacagaagat
961 gttgctaaat ttgcataaga agagttggat ggaaggtttg acacttcagg actacagtga
1021 acattgtaaa cacaatgaat cagtggtaaa ggagatgttg gaattagcca agaattacaa
1081 taaggctgta gaagaagaag ataagatgac acctgaacag ctggcaataa agaatgttgg
1141 caagcaggac cccaaacgtc atttggagga acatgtggat gtacttatga cctcaaatat
1201 tgtccagtgt ttagcagcta tgttggatac tgtcgtattt aaataaagca acgaaaaacg
1261 ccaaaaaaaa aaaaaaaa
//