LOCUS BC065830 1414 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens claudin 9, mRNA (cDNA clone MGC:75465 IMAGE:30364848),
complete cds.
ACCESSION BC065830
VERSION BC065830.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1414)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1414)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein
cDNA Library Preparation: Invitrogen Corp
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: l Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 44680149.
FEATURES Location/Qualifiers
source 1..1414
/db_xref="H-InvDB:HIT000262070"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:75465 IMAGE:30364848"
/tissue_type="Pituitary"
/clone_lib="NIH_MGC_179"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..1414
/gene="CLDN9"
/db_xref="GeneID:9080"
/db_xref="HGNC:HGNC:2051"
CDS 236..889
/gene="CLDN9"
/codon_start=1
/product="claudin 9"
/protein_id="AAH65830.1"
/db_xref="GeneID:9080"
/db_xref="HGNC:HGNC:2051"
/translation="MASTGLELLGMTLAVLGWLGTLVSCALPLWKVTAFIGNSIVVAQ
VVWEGLWMSCVVQSTGQMQCKVYDSLLALPQDLQAARALCVIALLLALLGLLVAITGA
QCTTCVEDEGAKARIVLTAGVILLLAGILVLIPVCWTAHAIIQDFYNPLVAEALKREL
GASLYLGWAAAALLMLGGGLLCCTCPPPQVERPRGPRLGYSIPSRSGASGLDKRDYV"
BASE COUNT 264 a 480 c 403 g 267 t
ORIGIN
1 gcgggactac gagtctgctt tgtgctccgc gaggaccaga aacacctgca agaggcacgg
61 agaggaggcg cctttcaaga ggcgcctttc atggaactga ggactggcct ggcttgggga
121 caccaacaag ccttccccct cctgctggac acagagacac ccacccagca caccagacac
181 accctctgag tcacctaggc cgcctggggc tgagaagacc taaccgaggg gccagatggc
241 ttcgaccggc ttagaactgc tgggcatgac cctggctgtg ctgggctggc tggggaccct
301 ggtgtcctgc gccctgcccc tgtggaaggt gaccgccttc atcggcaaca gcatcgtggt
361 ggcccaggtg gtgtgggagg gcctgtggat gtcctgcgtg gtgcagagca cgggccagat
421 gcagtgcaag gtgtacgact cactgctggc tctgccgcag gacctgcagg ccgcacgtgc
481 cctctgtgtc attgccctcc tgctggccct gcttggcctc ctggtggcca tcacaggtgc
541 ccagtgtacc acgtgtgtgg aggacgaagg tgccaaggcc cgtatcgtgc tcaccgcggg
601 ggtcatcctc ctcctcgccg gcatcctggt gctcatccct gtgtgctgga cggcgcacgc
661 catcatccag gacttctaca accccctggt ggctgaggcc ctcaagcggg agctgggggc
721 ctccctctac ctgggctggg cggcggctgc actgcttatg ctgggcgggg ggctcctctg
781 ctgcacgtgc cccccgcccc aggtcgagcg gccccgcgga cctcggctgg gctactccat
841 cccctcccgc tcgggtgcat ctggactgga caagagggac tacgtgtgag gcggaggttt
901 cccctgggag cccactgctc cccactgccc cgccctttcg accttggcct gatgaccaga
961 tgccctgctc catcacaacc tccttcccca ggaaaaccca ctttccaaaa gcccaagcta
1021 cacctggctg cagggctggg tcagctggcc tggctgagct cttctcagtg gggtcccctt
1081 tgatgttctc ccccaagttg ggcagcctag aggtgttggg aaccctggcc tgcccccacc
1141 tccccagtaa ttgtttcctt ccgttgccca ggacactggc tggccttcct tctcttctga
1201 gccctcccct gccccaggaa ccctggcctc accaaaacag cagcagctcg ttggctccaa
1261 aaccagggag cagaccatgc cctcccaacc ctggagttgt cagggagggc ctgcccatca
1321 cctccctctc cccaacatcc ccaccctcga gttggaaata aagagcattt gtaactggaa
1381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
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