LOCUS BC065819 1824 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens catenin (cadherin-associated protein), alpha 3, mRNA
(cDNA clone MGC:75041 IMAGE:6189390), complete cds.
ACCESSION BC065819
VERSION BC065819.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1824)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1824)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (26-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: f Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7019570.
FEATURES Location/Qualifiers
source 1..1824
/db_xref="H-InvDB:HIT000262059"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:75041 IMAGE:6189390"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1824
/gene="CTNNA3"
/gene_synonym="MGC26194"
/gene_synonym="VR22"
/db_xref="GeneID:29119"
/db_xref="MIM:607667"
CDS 94..1644
/gene="CTNNA3"
/gene_synonym="MGC26194"
/gene_synonym="VR22"
/codon_start=1
/product="CTNNA3 protein"
/protein_id="AAH65819.1"
/db_xref="GeneID:29119"
/db_xref="MIM:607667"
/translation="MSAETPITLNIDPQDLQVQTFTVEKLLEPLIIQVTTLVNCPQNP
SSRKKGRSKRASVLLASVEEATWNLLDKGEKIAQEATVLKDELTASLEEVRKESEALK
VSAERFTDDPCFLPKREAVVQAARALLAAVTRLLILADMIDVMCLLQHVSAFQRTFES
LKNVANKSDLQKTYQKLGKELENLDYLAFKRQQDLKSPNQRDEIAGARASLKENSPLL
HSICSACLEHSDVASLKASKDTVCEEIQNALNVISNASQGIQNMTTPPEPQAATLGSA
LDELENLIVLNPLTVTEEEIRPSLEKRLEAIISGAALLADSSCTRDLHRERIIAECNA
IRQALQDLLSEYMNNAGKKERSNTLNIALDNMCKKTRDLRRQLRKAIIDHVSDSFLDT
TVPLLVLIEAAKNGREKEIKEYAAIFHEHTSRLVEVANLACSMSTNEDGIKIVKIAAN
HLETLCPQIINAALALAARPKSQAVKNTMEMYKRTWENHIHVLTEAVDDITSIDDFLA
VSGMFLFF"
BASE COUNT 555 a 391 c 410 g 468 t
ORIGIN
1 gatagtggca ctgaatttct aaatacaaga aattgcttag acaattggtt tagtatctgt
61 atatgggcaa tactctgtcc tgcagtaggc agcatgtcag ctgaaacacc aatcacattg
121 aatatcgatc ctcaggatct gcaggtccaa acattcaccg tggagaagct actggagcct
181 ctcataatcc aggttaccac acttgtaaac tgtccccaga acccttccag caggaaaaaa
241 ggacgttcga aaagagccag tgtccttcta gcttctgtgg aggaagcaac ttggaattta
301 ttagacaagg gagagaagat tgcccaggaa gctacagttt taaaggatga gcttacggct
361 tcacttgagg aagttcgcaa agaaagtgaa gctctgaaag tatcagctga gagatttaca
421 gatgacccct gttttctccc aaaaagggag gctgtggttc aagctgcccg tgccttgctg
481 gctgcggtga cgagactcct tatccttgcg gacatgattg atgtcatgtg cctcttgcaa
541 catgtgtcag cttttcaaag gacatttgag tctctcaaaa atgttgccaa caaatctgac
601 ctccagaaaa cctaccagaa gcttgggaag gagctggaaa atttggatta tttagccttc
661 aaacgtcagc aggacttaaa atctccaaat cagagagatg aaattgcagg agcccgagct
721 tcactgaagg agaactctcc cctcttgcat tcaatttgtt cagcttgttt ggagcattct
781 gatgttgctt ccctcaaagc aagcaaggac acagtttgtg aagaaattca gaatgctctc
841 aatgtaattt caaatgcttc acaagggatc cagaatatga caaccccacc agaacctcag
901 gcagcaaccc tgggaagtgc ccttgatgag ctggagaatt taattgtcct gaatccactc
961 acagtaactg aggaggaaat acgaccatca ctagagaaac gccttgaagc cattatcagt
1021 ggggctgctc tgctggcgga ttcttcatgt acgagggact tacaccgaga gcggattatc
1081 gcagaatgca acgccattcg ccaggctctt caggatctgc tttcagagta catgaacaac
1141 gctggaaaaa aagaaaggag taataccctg aatattgctt tagacaacat gtgtaagaag
1201 acaagagacc ttcgcagaca gctccgcaag gctattatag atcatgtgtc agactctttc
1261 ctggatacga cagtccctct tttggttctc attgaagctg ctaagaatgg ccgggaaaag
1321 gaaataaaag aatatgctgc gatatttcat gaacacacca gcaggcttgt agaggtggca
1381 aatcttgctt gttccatgtc aacaaatgaa gatggaatta aaattgtcaa aattgcagcc
1441 aatcatttgg aaaccttgtg tccacagatt attaatgctg cacttgcttt ggctgcaaga
1501 cccaaaagtc aagcggtcaa aaacaccatg gaaatgtaca agcgtacatg ggagaatcat
1561 atacatgtcc tcactgaagc cgtagatgac attacaagca ttgatgactt ccttgctgta
1621 tctggtatgt ttttattctt ttaatttgtt tattttctct tgtcaatttt ataaaataga
1681 ataatactgg gacaggcatg gtggctcatg cctgtaatgc cgacactttg ggaagccgag
1741 gcaggtggat tacttgaggt cggggattcg ataccagcct ggccaacgtg atgaaacccc
1801 cgctctacta aaaaaaaaaa aaaa
//