LOCUS BC065769 1349 bp mRNA linear HUM 20-JUL-2004
DEFINITION Homo sapiens sterile alpha motif domain containing 9, mRNA (cDNA
clone IMAGE:4774373), partial cds.
ACCESSION BC065769
VERSION BC065769.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1349)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1349)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (26-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: k Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1349
/db_xref="H-InvDB:HIT000262050"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4774373"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_61"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>1349
/gene="SAMD9"
/gene_synonym="C7orf5"
/gene_synonym="FLJ20073"
/gene_synonym="KIAA2004"
/db_xref="GeneID:54809"
CDS 261..>1349
/gene="SAMD9"
/gene_synonym="C7orf5"
/gene_synonym="FLJ20073"
/gene_synonym="KIAA2004"
/codon_start=1
/product="SAMD9 protein"
/protein_id="AAH65769.1"
/db_xref="GeneID:54809"
/translation="MAKQLNLPENTDDWTKEDVNQWLESHKIDQKHREILTEQDVNGA
VLKWLKKEHLVDMGITHGPAIQIEELFKELRKTAIEDSIQTSKMGKPSKNAPKDQTVS
QKERRETSKQKQKGKENPDMANPSAMSTTAKGSKSLKVELIEDKIDYTKERQPSIDLT
CVSYPFDEFSNPYRYKLDFSLQPETGPGNLIDPIHEFKAFTNTATATEEDVKMKFSNE
VFRFASACMNSRTNGTIHFGVKDKPHGKIVGIKVTNDTKEALINHFNLMINKYFEDHQ
VQQAKKCIREPRFVEVLLPNSTLSDRFVIEVDIIPQFSECQYDYFQIKMQNYNNKIWE
QSKKFSLFVRDGTSSKDITKKKKKKKKKK"
BASE COUNT 516 a 238 c 260 g 335 t
ORIGIN
1 ggggatacat agacttccgt taaaaccaga atgaggaaaa tacttttctc tagcatcgta
61 ggaggaagaa aacaaacaca tcagatattt tcagcactaa aagagatggt tttccccaca
121 tatatgtaaa agaaatttgc aagactactg gattttgatc tcatggttgc agtgggtgaa
181 taggtggcct tttgtgatct cctacatcac cctggaagtg agacttcttc ggtttcttct
241 agagtcagtt tggtatcaga atggcaaagc aacttaacct tccagaaaat acagatgatt
301 ggacaaaaga ggatgtaaat cagtggttag aaagtcataa gattgaccaa aaacacaggg
361 aaattttgac tgaacaagac gtgaatggag cagtcttgaa gtggttaaaa aaagaacatc
421 ttgttgatat gggcatcaca catggaccag ctattcaaat agaagaacta ttcaaagaat
481 tgcggaaaac agccattgaa gattcgattc agacatctaa gatgggaaag cccagtaaaa
541 atgctcctaa agaccaaact gtgtctcaaa aggaacgtag agaaacttca aagcaaaaac
601 aaaagggtaa agagaaccca gatatggcta atccgtctgc aatgagtaca actgctaaag
661 gttctaagtc actaaaagtt gagctcatag aagataaaat agattataca aaggaaaggc
721 aaccatccat agacctgaca tgtgtatcat atccatttga tgaattcagt aatccatatc
781 gttacaagtt ggattttagt ctacagcctg aaacaggacc aggcaatctc attgatccga
841 tacatgaatt caaagccttc acaaatacag caacagccac agaagaggat gtcaagatga
901 aatttagcaa tgaggttttc cgatttgctt cagcttgtat gaattcacgt accaatggca
961 ctattcattt tggagtcaaa gacaaacccc atgggaaaat tgttggcatc aaagtcacca
1021 atgataccaa ggaagccctc attaaccatt tcaatctgat gataaacaag tattttgaag
1081 accatcaagt ccaacaagca aagaagtgca ttcgagagcc aagatttgtg gaagttttac
1141 tgccaaatag tactctatct gacagatttg ttattgaagt ggacattatt ccacagttct
1201 ctgaatgcca atatgattat ttccagatta aaatgcaaaa ttacaacaac aaaatatggg
1261 aacaaagtaa aaaattctca ctatttgtgc gagatgggac cagctctaag gacattacga
1321 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//