LOCUS BC065729 1170 bp mRNA linear HUM 08-FEB-2007
DEFINITION Homo sapiens COMM domain containing 5, mRNA (cDNA clone MGC:72046
IMAGE:6452461), complete cds.
ACCESSION BC065729
VERSION BC065729.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1170)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1170)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: m Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923429.
FEATURES Location/Qualifiers
source 1..1170
/db_xref="H-InvDB:HIT000262010"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:72046 IMAGE:6452461"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_142"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1170
/gene="COMMD5"
/gene_synonym="HCARG"
/gene_synonym="HT002"
/db_xref="GeneID:28991"
/db_xref="HGNC:HGNC:17902"
/db_xref="MIM:608216"
CDS 255..929
/gene="COMMD5"
/gene_synonym="HCARG"
/gene_synonym="HT002"
/codon_start=1
/product="COMM domain containing 5"
/protein_id="AAH65729.1"
/db_xref="GeneID:28991"
/db_xref="HGNC:HGNC:17902"
/db_xref="MIM:608216"
/translation="MSAVGAATPYLHHPGDSHSGRVSFLGAQLPPEVAAMARLLGDLD
RSTFRKLLKFVVSSLQGEDCREAVQRLGVSANLPEEQLGALLAGMHTLLQQALRLPPT
SLKPDTFRDQLQELCIPQDLVGDLASVVFGSQRPLLDSVAQQQGAWLPHVADFRWRVD
VAISTSALARSLQPSVLMQLKLSDGSAYRFEVPTAKFQELRYSVALVLKEMADLEKRC
ERRLQD"
BASE COUNT 242 a 317 c 372 g 239 t
ORIGIN
1 ggggccgctt ttggctgcat cagccgggga ttgccggcgc caggtgctgg gggcgactcg
61 gacagcggga gcgtggggtg gagtaggatg gagtctccct cccgagctgg gggtgtgggc
121 ctaggaaagg ctgcttcgcc gctgtgttcg gagagctctg gatactgcgg ggcttttccg
181 cggaggagcg cccgccggca tctgcatctg ggaccgacct cctgggctgg ctgatcaaag
241 aggaagcagc agcaatgtct gctgtggggg ctgcaactcc atacctgcat catcctggtg
301 atagtcacag tggccgagtg agtttcttgg gggcccagct tcctccagag gtggcagcaa
361 tggcccggct actaggggac ctagacagga gcacgttcag aaagttgctg aagtttgtgg
421 tcagcagcct gcagggggag gactgccgag aggctgtgca gcgtcttggg gtcagcgcca
481 acctgccgga ggagcagctg ggtgccctgc tggcaggcat gcacacactg ctccagcagg
541 ccctccgtct gccccccacc agcctgaagc ctgacacctt cagggaccag ctccaggagc
601 tctgcatccc ccaagacctg gtcggggact tggccagcgt ggtatttggg agccagcggc
661 ccctccttga ttctgtggcc cagcagcagg gggcctggct gccgcatgtt gctgactttc
721 ggtggcgggt ggatgtagca atctccacca gtgccctggc tcgctccctg cagccgagcg
781 tcctgatgca gctgaagctt tcagatgggt cagcataccg ctttgaggtc cccacagcca
841 agttccagga gctgcggtac agcgtggccc tggtcctaaa ggagatggca gatctggaga
901 agaggtgtga gcgcagactg caggactgac ccctcacttg accagtccca ttcagatccg
961 gcttggacag gcacctgaga tggtgccaaa gtgcagctga ctcttcccac gacagccctg
1021 cccttcccat gaggcaggct cttcagtgag tgtttgaacg taattatgta gttttctgtt
1081 taattgaaaa agagagctat gccttttttt ctttttggaa gtaaagcagc taaaaacatg
1141 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//