LOCUS BC065704 1426 bp mRNA linear HUM 29-JUL-2008
DEFINITION Homo sapiens family with sequence similarity 180, member B, mRNA
(cDNA clone IMAGE:6190005), partial cds.
ACCESSION BC065704
VERSION BC065704.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1426)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1426)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: f Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction.
FEATURES Location/Qualifiers
source 1..1426
/db_xref="H-InvDB:HIT000261985"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6190005"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1426
/gene="FAM180B"
/db_xref="GeneID:399888"
/db_xref="HGNC:HGNC:34451"
CDS <1..628
/gene="FAM180B"
/codon_start=2
/product="FAM180B protein"
/protein_id="AAH65704.1"
/db_xref="GeneID:399888"
/db_xref="HGNC:HGNC:34451"
/translation="AEVCGRQMREQRTAEQSETQRTWLSMAATLQFLVCLVVAICLLS
GVTTTQPHAGQPMDSTSVGGGLQEPEAPEVMFELLWAGLELDVMGQLHIQDEELASTH
PGRRLRLLLQHHVPSDLEGTEQWLQQLQDLRKGPPLSTWDFEHLLLTGLSCVYRLHAA
SEAEERGRWAQVFALLAQETLWDLCKGFCPQDRPPSLGSWASILDPFP"
BASE COUNT 297 a 374 c 435 g 320 t
ORIGIN
1 agctgaggtg tgtggcaggc agatgaggga gcagagaact gctgaacaga gtgagactca
61 gaggacgtgg ttgagcatgg ctgcgaccct gcagttcctg gtttgcctgg tggtagccat
121 ttgtctcctc tctggtgtga ctacaaccca gccccatgca gggcagccca tggacagcac
181 cagcgtggga ggtggcctgc aggagccaga ggccccggaa gtgatgtttg agctgctctg
241 ggctgggctg gagctggatg tcatggggca gctgcacatc caggatgagg aactagcgtc
301 cacacaccca ggccgccgac tcagactcct cctgcagcac cacgtgccca gtgacttgga
361 gggcactgag cagtggctgc agcagctcca ggacctgcgg aaggggcctc ctcttagcac
421 ttgggacttt gaacatctgc tcctcacagg cctgtcctgc gtctaccggc tccacgcagc
481 tagtgaggct gaggaacggg gccgctgggc ccaggtcttc gctctcctgg cacaggaaac
541 actctgggac ctgtgcaaag gtttctgccc ccaggaccgg cccccttccc tggggtcctg
601 ggcctccatc cttgacccct tcccctgacc ctcctctttt gttctttcac ctgccattac
661 cccctcccat ctcctcctca accccccagg cagacccatc ttgcgcaggg gcttctgtct
721 ggcatctgat tcttttcacc gtgttcagat ctctgggctt ggcttgcacc ctggacaccc
781 cctctctgct taccccgacc agatcttgtt tcctagatct tgagaggcta agaacccagg
841 ctctgggtcg caaggagtgc gcaaggagtg ggcacagagc taagggcacg acttgcaggc
901 agtgtgtgtg tgagtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtggagatc
961 aggggtcagg gttgagaagt gtgttcaaga gatgctgaag ggaagctgcc ccaagtaagg
1021 cctggtcaga ccttccaact cctaccctgg cagtctgtga caggtcctgt ggaattcaca
1081 ggaatcctct aggtgctgag catccccttt taggcacaac caaggatttg gggtctctga
1141 gcctccaagt tcccatctgg gttgggagaa tcgacttttt gagttctgtc agttggaaga
1201 gtggagggaa gcagggggag ggaggaacat tatctctttt ggggtaggga ggcaatatct
1261 caacaagcgt cgggtgaata cctcagaggg gggagtaagg ctgggagacc aaggagagac
1321 aagcggaggt gggctggagc aggtgtggcc ctgattctgt gttgctcttc tcataaaatg
1381 ttctgtttcg gcaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//