LOCUS BC065571 1529 bp mRNA linear HUM 23-JUN-2006
DEFINITION Homo sapiens Y box binding protein 1, mRNA (cDNA clone MGC:75111
IMAGE:6171221), complete cds.
ACCESSION BC065571
VERSION BC065571.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1529)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1529)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: p Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34098945.
FEATURES Location/Qualifiers
source 1..1529
/db_xref="H-InvDB:HIT000261977"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:75111 IMAGE:6171221"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1529
/gene="YBX1"
/gene_synonym="BP-8"
/gene_synonym="CSDA2"
/gene_synonym="CSDB"
/gene_synonym="DBPB"
/gene_synonym="MDR-NF1"
/gene_synonym="NSEP-1"
/gene_synonym="YB-1"
/gene_synonym="YB1"
/db_xref="GeneID:4904"
/db_xref="HGNC:HGNC:8014"
/db_xref="MIM:154030"
CDS 139..1113
/gene="YBX1"
/gene_synonym="BP-8"
/gene_synonym="CSDA2"
/gene_synonym="CSDB"
/gene_synonym="DBPB"
/gene_synonym="MDR-NF1"
/gene_synonym="NSEP-1"
/gene_synonym="YB-1"
/gene_synonym="YB1"
/codon_start=1
/product="Y box binding protein 1"
/protein_id="AAH65571.1"
/db_xref="GeneID:4904"
/db_xref="HGNC:HGNC:8014"
/db_xref="MIM:154030"
/translation="MSSEAETQQPPAAPPAAPALSAADTKPGTTGSGAGSGGPGGLTS
AAPAGGDKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRS
VGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQ
NYQNSESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVM
EGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEEDKENQGDETQGQQP
PQRRYRRNFNYRRRRPENPKPQDGKETKAADPPAENSSAPEAEQGGAE"
BASE COUNT 457 a 389 c 391 g 292 t
ORIGIN
1 gtcgcccacg cgtccggagc ggagagcgga ccccagagag ccctgagcag ccccaccgcc
61 gccgccggcc tagttaccat cacaccccgg gaggagccgc agctgccgca gccggcccca
121 gtcaccatca ccgcaaccat gagcagcgag gccgagaccc agcagccgcc cgccgccccc
181 cccgccgccc ccgccctcag cgccgccgac accaagcccg gcactacggg cagcggcgca
241 gggagcggtg gcccgggcgg cctcacatcg gcggcgcctg ccggcgggga caagaaggtc
301 atcgcaacga aggttttggg aacagtaaaa tggttcaatg taaggaacgg atatggtttc
361 atcaacagga atgacaccaa ggaagatgta tttgtacacc agactgccat aaagaagaat
421 aaccccagga agtaccttcg cagtgtagga gatggagaga ctgtggagtt tgatgttgtt
481 gaaggagaaa agggtgcgga ggcagcaaat gttacaggtc ctggtggtgt tccagttcaa
541 ggcagtaaat atgcagcaga ccgtaaccat tatagacgct atccacgtcg taggggtcct
601 ccacgcaatt accagcaaaa ttaccagaat agtgagagtg gggaaaagaa cgagggatcg
661 gagagtgctc ccgaaggcca ggcccaacaa cgccggccct accgcaggcg aaggttccca
721 ccttactaca tgcggagacc ctatgggcgt cgaccacagt attccaaccc tcctgtgcag
781 ggagaagtga tggagggtgc tgacaaccag ggtgcaggag aacaaggtag accagtgagg
841 cagaatatgt atcggggata tagaccacga ttccgcaggg gccctcctcg ccaaagacag
901 cctagagagg acggcaatga agaagataaa gaaaatcaag gagatgagac ccaaggtcag
961 cagccacctc aacgtcggta ccgccgcaac ttcaattacc gacgcagacg cccagaaaac
1021 cctaaaccac aagatggcaa agagacaaaa gcagccgatc caccagctga gaattcgtcc
1081 gctcccgagg ctgagcaggg cggggctgag taaatgccgg cttaccatct ctaccatcat
1141 ccggtttagt catccaacaa gaagaaatat gaaattccag caataagaaa tgaacaaaag
1201 attggagctg aagacctaaa gtgcttgctt tttgcccgtt gaccagataa atagaactat
1261 ctgcattatc tatgcagcat ggggttttta ttatttttac ctaaagacgt ctctttttgg
1321 taataacaaa cgtgtttttt aaaaaagcct ggtttttctc aatacgcctt taaaggtttt
1381 taaattgttt catatctggt caagttgaga tttttaagaa cttcattttt aatttgtaat
1441 aaaagtttac aacttgattt tttcaaaaaa gtcaacaaac tgcaagcacc tgttaataaa
1501 ggtcttaaat aataaaaaaa aaaaaaaaa
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