LOCUS BC065268 3290 bp mRNA linear HUM 03-FEB-2004 DEFINITION Homo sapiens protein-O-mannosyltransferase 1, mRNA (cDNA clone MGC:74644 IMAGE:6155142), complete cds. ACCESSION BC065268 VERSION BC065268.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3290) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3290) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (12-JAN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 140 Row: l Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21361381. FEATURES Location/Qualifiers source 1..3290 /db_xref="H-InvDB:HIT000261831" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:74644 IMAGE:6155142" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3290 /gene="POMT1" /gene_synonym="RT" /db_xref="GeneID:10585" /db_xref="MIM:607423" CDS 388..2565 /gene="POMT1" /gene_synonym="RT" /codon_start=1 /product="POMT1 protein" /protein_id="AAH65268.1" /db_xref="GeneID:10585" /db_xref="MIM:607423" /translation="MWGFLKRPVVVTADINLSLVALTGMGLLSRLWRLTYPRAVVFDE VYYGQYISFYMKQIFFLDDSGPPFGHMVLALGGYLGGFDGNFLWNRIGAEYSSNVPVW SLRLLPALAGALSVPMAYQIVLELHFSHCAAMGAALLMLIENALITQSRLMLLESVLI FFNLLAVLSYLKFFNCQKHSPFSLSWWFWLTLTGVACSCAVGIKYMGVFTYVLVLGVA AVHAWHLLGDQTLSNVCVFCHLLARAVALLVIPVVLYLLFFYVHLILVFRSGPHDQIM SSAFQASLEGGLARITQGQPLEVAFGSQVTLRNVFGKPVPCWLHSHQDTYPMIYENGR GSSHQQQVTCYPFKDVNNWWIVKDPRRHQLVVSSPPRPVRHGDMVQLVHGMTTRSLNT HDVAAPLSPHSQEVSCYIDYNISMPAQNLWRLEIVNRGSDTDVWKTILSEVRFVHVNT SAVLKLSGAHLPDWGYRQLEIVGEKLSRGYHGSTVWNVEEHRYGASQEQRERERELHS PAQVDVSRNLSFMARFSELQWRMLALRSDDSEHKYSSSPLEWVTLDTNIAYWLHPRTS AQIHLLGNIVIWVSGSLALAIYALLSLWYLLRRRRNVHDLPQDAWLRWVLAGALCAGG WAVNYLPFFLMEKTLFLYHYLPALTFQILLLPVVLQHISDHLCRSQLQRSIFSALVVA WYSSACHVSNTLRPLTYGDKSLSPHELKALRWKDSWDILIRKH" misc_feature 445..1089 /gene="POMT1" /gene_synonym="RT" /note="PMT; Region: Dolichyl-phosphate-mannose-protein mannosyltransferase. This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyse the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.)" /db_xref="CDD:pfam02366" misc_feature 1282..1461 /gene="POMT1" /gene_synonym="RT" /note="MIR; Region: MIR domain. The MIR (protein mannosyltransferase, IP3R and RyR) domain is a small domain that may have a ligand transferase function" /db_xref="CDD:pfam02815" misc_feature 1495..1668 /gene="POMT1" /gene_synonym="RT" /note="MIR; Region: MIR domain. The MIR (protein mannosyltransferase, IP3R and RyR) domain is a small domain that may have a ligand transferase function" /db_xref="CDD:pfam02815" misc_feature 1693..1860 /gene="POMT1" /gene_synonym="RT" /note="MIR; Region: MIR domain. The MIR (protein mannosyltransferase, IP3R and RyR) domain is a small domain that may have a ligand transferase function" /db_xref="CDD:pfam02815" BASE COUNT 672 a 921 c 975 g 722 t ORIGIN 1 ggcggtgggt ggtgcggagt gccgagcggc ctcaccccca accgtcggcc cagtcggacg 61 gttccgaggc gttgccggga gccgggcgcg gctctgtgtg gactcggaga aacgcgggta 121 catttgggga caccggggac gagagcccag cccggacttg ggggagtccg tcagtgccgg 181 acgcgggtcc ctggcttgcg gacgggctgg ggccgggggc gtccccgtct ttccggagct 241 gggggcgggg ttcgggcccg ggcagatgcg gcgttcgggc ggccgagccc cgaagtaaga 301 actccgtggc gcgtgcagcc ctagggagga agggcgtgct gcgggtgcag tctcaggggc 361 gtctgcctga gcccgctttt ctacaagatg tggggatttt tgaagcgccc tgtagtggtg 421 acggctgaca tcaacttgag ccttgtggcc ctgactggga tggggttact gagccggctg 481 tggcgactca cctacccgcg ggctgtggtt tttgacgaag tatattatgg gcagtacatc 541 tctttttaca tgaaacaaat cttcttcttg gatgacagtg ggccgccatt tggccacatg 601 gtgctggcct tgggaggtta tttaggagga ttcgatggca attttttgtg gaacagaatt 661 ggagcagaat acagtagcaa cgtgcctgtg tggtccctgc gcctgctgcc agcactcgcg 721 ggggccttgt cggtccccat ggcctaccag atagtgttgg agctccactt ttctcattgt 781 gccgccatgg gagctgctct gttgatgctt atcgagaatg ctctcatcac tcagtcaagg 841 ctaatgcttt tggaatcagt gttaatattt ttcaatctat tggccgtgtt gtcctacctg 901 aagttcttca actgccaaaa gcacagccct ttttctctga gctggtggtt ctggctaaca 961 ctgacagggg tcgcttgttc ctgtgcagtg ggcatcaagt acatgggtgt gttcacgtac 1021 gtgctcgtgc tgggtgttgc agctgtccat gcctggcacc tgcttggaga ccagactttg 1081 tccaatgtct gtgtgttctg tcacttgctc gcccgagcag tggctttgct ggtcatcccg 1141 gtcgtcctgt acttactgtt cttctacgtc cacttgattc tagtcttccg ctctgggccc 1201 cacgaccaaa tcatgtccag tgccttccag gccagcttag agggaggact agctcggatc 1261 acccagggtc agccactgga ggtggccttt gggtcccagg tcactctgag gaacgtcttt 1321 gggaaacctg tgccctgctg gcttcattcc caccaggaca cctaccccat gatatatgag 1381 aacggccgag gcagctccca ccagcaacag gtgacctgtt accccttcaa agacgtcaat 1441 aactggtgga ttgtaaagga tcccaggagg caccagctgg tggtgagcag ccctccgaga 1501 cctgtgaggc acggggacat ggtgcagctg gtccacggca tgaccacccg ctccctgaac 1561 acgcatgatg ttgcagcccc cctgagcccc cattcacagg aggtctcctg ctacattgac 1621 tataacatct ccatgcccgc ccagaacctc tggagactgg aaattgtgaa cagaggatct 1681 gacacagacg tctggaagac catcctctca gaggtccgct ttgtgcacgt gaacacttcc 1741 gctgtcttaa agctgagcgg ggctcacctc cctgactggg ggtatcggca actggagatc 1801 gtcggggaga agctgtcccg gggctaccac gggagcacgg tgtggaacgt ggaggagcac 1861 cgatacggcg cgagccagga gcagagggag cgggaacggg agctgcactc acctgcgcag 1921 gtggacgtca gcaggaacct cagcttcatg gcgagattct cggagctgca gtggaggatg 1981 ctggcgctga gaagtgatga ctcggaacac aagtacagct ccagcccact ggagtgggtc 2041 accctggaca ccaatattgc ctactggctg caccccagga ccagcgctca gatccaccta 2101 cttggaaaca tagtgatctg ggtttcgggc agcctcgctc tggccatcta cgccctgctg 2161 tccttgtggt acctgctccg acggcgaaga aatgtccatg acctccctca ggatgcctgg 2221 ctgcgctggg tgctggctgg ggcgctgtgt gccggtggct gggcagtgaa ctacctcccg 2281 ttcttcctga tggagaagac actcttcctc taccactacc tgcccgcact caccttccaa 2341 atccttctgc tccctgtggt cctgcagcac atcagcgacc acctgtgcag gtcccagctc 2401 cagaggagca tcttcagcgc cctggtggtg gcctggtact cctccgcgtg ccacgtgtcc 2461 aacacgctgc gcccactcac ctacggggac aagtcactct cgccacatga actcaaggcc 2521 cttcgctgga aagacagctg ggacatcttg atccgaaaac actagaacaa gagtgtggca 2581 aagaacaccc gtgctggggt cgggacgagg ttgaagggtc ttggtcaatg tacgtaatga 2641 gcagggtggg ccccacgctg ggaggacacg ggctgggctg agcagggcct ctagtggaac 2701 acatgggggt ctcattgaaa agctctctga tgagcacctc cttttgtgca aagttaattt 2761 tttctcgaca ataaagatat tccgtgtctt cacccctgaa ctaagacaca gggagtattt 2821 cagaggccag cgtaggagtc atcgacaacg aaaagccgag aacccagggc cagcagtgga 2881 gcctcagcag accagggcct ggtccttgct aattgctgca gggtggagtt tgatctggca 2941 gacccgatcc tccttcatga acacccagca acctgagcaa gtcccggccc tgccctcagc 3001 gagcccggca ggcgtcccgg gacagctcag tgttggaggg ccacctgaac cacgagccag 3061 ggctggggct tgcatgtcat tgtctatgac agcgtcaaga ctggcccttg gcaccgtgct 3121 gtgtggaaac cctcccctct gagactccac tgagacgtgg ctgagtgaaa tcttcctcgt 3181 cagtggtcaa ggtgtgtcat ccatacagct ccatgccttt gtctttttta aatgtaatta 3241 aaaaaggaac caactggcaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //