LOCUS BC065259 1554 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens structural maintenance of chromosomes 4, mRNA (cDNA
clone IMAGE:6145405), partial cds.
ACCESSION BC065259
VERSION BC065259.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1554)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1554)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: j Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50658064.
FEATURES Location/Qualifiers
source 1..1554
/db_xref="H-InvDB:HIT000261822"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6145405"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>1554
/gene="SMC4"
/gene_synonym="CAPC"
/gene_synonym="hCAP-C"
/db_xref="GeneID:10051"
/db_xref="HGNC:HGNC:14013"
/db_xref="MIM:605575"
CDS 284..>1554
/gene="SMC4"
/gene_synonym="CAPC"
/gene_synonym="hCAP-C"
/codon_start=1
/product="SMC4 protein"
/protein_id="AAH65259.1"
/db_xref="GeneID:10051"
/db_xref="HGNC:HGNC:14013"
/db_xref="MIM:605575"
/translation="MPRKGTQPSTARRREEGPPPPSPDGASSDAEPEPPSGRTESPAT
AAETASEELDNRSLEEILNSIPPPPPPAMTNEAGAPRLMITHIVNQNFKSYAGEKILG
PFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTV
EVHFQKIIDKEGDDYEVIPNSNFYVSRTACRDNTSVYHISGKKKTFKDVGNLLRSHGI
DLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGCGRLNEPIKVLCRRVEI
LNEHRGEKLNRVKMVEKEKDALEGEKNIAIEFLTLENEIFRKKNHVCQYYIYELQKRI
AEMETQKEKIHEDTKEINEKSNILSNEMKAKNKDVKDTEKKLNKITKFIEENKEKFTQ
LDLEDVQVREKLKHATSKAKKTGETTSKKKK"
BASE COUNT 521 a 308 c 367 g 358 t
ORIGIN
1 cccggagccg aaacaccggt aggagcgggg aggtgggtac tacacaaccg tctccagcct
61 tggtctgagt ggactgtcct gcaggtcttg ttaagaaacc agtcctgcct tcttgccact
121 cgtgtctttc gatggctccc ttcccgaagt cccgctgcct ctaagcggag tgttaagcgg
181 ggctctcgga agccggtgga ccgagatttc cccgggtggg gcgggcgcgg tgtagcggcc
241 cgcgggctga cttgctcccg gctgtccccc ggccccagcg accatgcccc gtaaaggcac
301 ccagccctcc actgcccggc gcagagagga agggccgccg ccgccgtccc ctgacggcgc
361 cagcagcgac gcggagcctg agccgccgtc cggccgcacg gagagcccag ccaccgccgc
421 agagactgca agtgaggaac ttgataatag aagtttagaa gagattttga acagcattcc
481 tcctcccccg cctccagcaa tgaccaatga agctggagct cctcggctta tgataactca
541 tattgtaaac cagaacttca aatcctatgc tggggagaaa attctgggac ctttccataa
601 gcgcttttcc tgtattatcg ggccaaatgg cagtggcaaa tccaatgtta ttgattctat
661 gctttttgtg tttggctatc gagcacaaaa aataagatct aaaaaactct cagtattaat
721 acataattct gatgaacaca aggacattca gagttgtaca gtagaagttc attttcaaaa
781 gataattgat aaggaagggg atgattatga agtcattcct aacagtaatt tctatgtatc
841 cagaacggcc tgcagagata atacttctgt ctatcacata agtggaaaga aaaagacatt
901 taaggatgtt ggaaatcttc ttcgaagcca tggaattgac ttggaccata atagattttt
961 aattttacag ggtgaagttg aacaaattgc tatgatgaaa ccaaaaggcc agactgaaca
1021 cgatgagggt atgcttgaat atttagaaga tataattggt tgtggacggc taaatgaacc
1081 tattaaagtc ttgtgtcgga gagttgaaat attaaatgaa cacagaggag agaagttaaa
1141 cagggtaaag atggtggaaa aggaaaagga tgccttagaa ggagagaaaa acatagctat
1201 cgaatttctt accttggaaa atgaaatatt tagaaaaaag aatcatgttt gtcaatatta
1261 tatttatgag ttgcagaaac gaattgctga aatggaaact caaaaggaaa aaattcatga
1321 agataccaaa gaaattaatg agaagagcaa tatactatca aatgaaatga aagctaagaa
1381 taaagatgta aaagatacag aaaagaaact gaataaaatt acaaaattta ttgaggagaa
1441 taaagaaaaa tttacacagc tagatttgga agatgttcaa gttagagaaa agttaaaaca
1501 tgccacgagt aaagccaaaa aaactggaga aacaacttca aaaaaaaaaa aaaa
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