LOCUS BC065258 3961 bp mRNA linear HUM 22-FEB-2005
DEFINITION Homo sapiens superkiller viralicidic activity 2-like 2 (S.
cerevisiae), mRNA (cDNA clone IMAGE:6146338), partial cds.
ACCESSION BC065258
VERSION BC065258.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3961)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3961)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (12-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: j Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39930352.
FEATURES Location/Qualifiers
source 1..3961
/db_xref="H-InvDB:HIT000261821"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6146338"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..3961
/gene="SKIV2L2"
/gene_synonym="KIAA0052"
/db_xref="GeneID:23517"
CDS <1..3134
/gene="SKIV2L2"
/gene_synonym="KIAA0052"
/codon_start=3
/product="SKIV2L2 protein"
/protein_id="AAH65258.1"
/db_xref="GeneID:23517"
/translation="KMADAFGDELFSVFEGDSTTAAGTKKDKEKDKGKWKGPPGSADK
AGKRFDGKLQSESTNNGKNKRDVDFEGTDEPIFGKKPRIEESITEDLSLADLMPRVKV
QSVETVEGCTHEVALPAEEDYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLV
SAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVT
INPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPD
NVHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVD
ENGDFREDNFNTAMQVLRDAGDLAKGDQKGRKGGTKGPSNVFKIVKMIMERNFQPVII
FSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLK
RGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGK
DFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHL
TYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESV
VIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKS
NVKPNSGELDPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAI
SSVRLYIPKDLRPVDNRQSVLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKVIQKV
EAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRK
RVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFV
FQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLSSFKPHLMDVVY
TWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITK
IKRDIVFAASLYL"
BASE COUNT 1318 a 656 c 863 g 1124 t
ORIGIN
1 caaaaatggc ggacgcattc ggagatgagc tgttcagcgt gttcgagggc gactcgacca
61 ctgcggcggg aaccaaaaaa gacaaggaaa aggacaaggg gaaatggaag gggcctccag
121 ggtctgcaga caaggcaggg aaacgttttg atggtaaatt acaatcagaa tcaactaata
181 atggaaaaaa taagagagat gtagatttcg aaggtacaga tgaacccatt tttggaaaga
241 agcccaggat agaagagtca ataactgaag acttaagttt ggcagacctg atgcccagag
301 tcaaggtaca atcagttgaa actgttgaag ggtgtacaca tgaggttgca cttcctgcag
361 aagaggatta tttaccactt aaaccacgag ttggaaaagc tgctaaggaa tacccgttca
421 ttcttgatgc ttttcaaaga gaggccattc agtgtgttga caataatcag tctgttctag
481 tatctgcaca tacctcagcg ggaaaaacag tatgcgccga gtatgccatt gcattggcct
541 taagggaaaa gcagcgtgta atatttacca gcccaattaa ggctctgagt aaccaaaaat
601 accgtgaaat gtatgaagaa tttcaagatg ttggtttgat gactggtgat gttactatta
661 atcctacggc atcttgtctt gttatgacca cagagatttt gagaagtatg ctttacagag
721 gttccgaagt tatgagagaa gttgcttggg ttatatttga tgaaattcat tatatgagag
781 attcagaacg tggtgtagta tgggaagaaa ctattatttt gcttcctgat aacgtccact
841 atgtctttct ttcggctact attccaaatg cccgacagtt tgctgaatgg atttgccatt
901 tacataaaca gccttgtcat gttatttaca cagattatcg gcccactcca ttgcaacact
961 acatttttcc agcaggggga gatggcctgc atcttgtggt tgatgaaaat ggtgacttca
1021 gagaagataa ttttaatact gcaatgcaag tgcttcgaga tgcaggtgat ttggccaaag
1081 gagaccagaa agggcggaaa ggaggaacaa aaggaccatc aaatgttttc aaaattgtga
1141 agatgattat ggaaagaaat ttccaacctg tgattatttt cagttttagt aagaaagatt
1201 gtgaagccta tgcacttcaa atgaccaaat tagatttcaa cacagatgaa gaaaagaaga
1261 tggttgaaga agtattcagt aatgcaattg attgcttatc cgatgaagat aaaaaactcc
1321 ctcaggtaga acatgtactt cctcttttga agaggggaat tggtattcac catggtggtt
1381 tacttcctat tttgaaagaa actatagaaa ttctcttttc tgaaggattg ataaaggcct
1441 tatttgccac ggagaccttt gctatgggaa ttaacatgcc agctagaact gttttattta
1501 caaatgcccg caaatttgat gggaaggatt tccgatggat ttcttctggt gaatacattc
1561 agatgtctgg tcgtgctgga aggagaggaa tggatgatag aggaattgta attcttatgg
1621 tagatgaaaa gatgagccca acaattggaa aacaattact taagggctcc gctgatcctc
1681 taaatagtgc tttccatttg acctacaaca tggttttgaa cttactacgt gtagaagaaa
1741 ttaatcctga gtacatgttg gaaaaatcct tctaccagtt tcagcattat agagcaattc
1801 caggagtagt agagaaggta aagaattcag aagaacagta taataaaata gtaattccca
1861 atgaagaaag tgtggttatc tattataaga ttagacagca gcttgccaaa ttgggtaaag
1921 aaattgaaga atatattcac aaaccaaaat actgcttacc ttttctacaa ccaggtcgtt
1981 tggtaaaggt aaagaatgaa ggagatgact ttggctgggg agtagtggtg aatttctcaa
2041 aaaagtcaaa tgttaagcct aactctggtg aactggatcc tttgtatgta gtagaagtac
2101 ttctgcgctg tagcaaagag agcttgaaaa attcagctac agaagctgca aaaccagcta
2161 aacctgatga gaaaggagag atgcaggttg tcccagtttt ggtgcatctc ctgtctgcta
2221 tcagcagtgt taggctttac attcctaaag accttcggcc ggtggacaat agacagagtg
2281 ttttaaaatc aatacaggaa gttcagaaac gttttcctga cggcatcccc ttattagacc
2341 ctattgatga tatgggcatt caagatcaag ggctgaaaaa agtcattcag aaagtagaag
2401 cttttgagca tcgaatgtat tctcatccac ttcacaatga tccaaatttg gaaactgtgt
2461 atacgctttg tgaaaaaaaa gcacagattg caatagatat taaatctgca aagcgagaac
2521 tgaagaaagc aagaacagtc ctacaaatgg atgaactcaa atgtcgcaaa cgtgttttaa
2581 gaaggttggg atttgctact tcttctgatg taatagagat gaaaggacga gtggcttgtg
2641 agataagcag tgctgatgag ctccttctaa ctgagatgat gtttaatggc cttttcaatg
2701 acctttctgc agaacaggca acagcattat taagctgctt tgtgtttcaa gagaattcta
2761 gtgagatgcc caaattaaca gaacaattag caggaccact tcgtcaaatg caggaatgtg
2821 ctaaaagaat tgcaaaagtt tcagcagaag ccaaattgga aattgatgag gaaacttatc
2881 taagctcatt taaacctcac ttaatggatg tagtatatac ctgggcaact ggagctacat
2941 ttgcccatat ctgcaaaatg acagatgtct ttgaaggcag cataattcgt tgtatgaggc
3001 gcctggaaga attgcttcga caaatgtgtc aagcagcaaa agccattgga aacactgagc
3061 tggaaaataa atttgcagaa ggaatcacca aaatcaagag agatattgtg tttgctgcca
3121 gcctctactt gtagagtcag ctaaaggaat gtgagatttt aaattattga ccacctgttt
3181 gattacagtt gactacaaat gcctgcaagt gtggatttgg ttctcccata cattttaata
3241 tgtattatat ttaaatcaaa catcattcat agaaagcata ttacatacat gtttatacat
3301 aagcattaca tttttttaat aaaaatgtat acaggtgggg cactgttttg gtggaaggct
3361 tggagttttt ttaatgagtt tagagctatt agataaccac tgagttaaag gtaactatgt
3421 acacacaaag tgtgcatcca agaggcatag cagcagcaga agtctttaaa ggcttgtaca
3481 ccaggaagaa agatgcatcc tcttgccttg tggcaatcat tttcctttag aaaacaggcc
3541 agcttcacct gggcaccctg ctgcctttca aggctggtga ttgctcggat agtgattccc
3601 agttgttggt gtttcatgca gagttgtatg agagtcctcc tcttttcttt ctttaaaaga
3661 agttctttct ttgaagaaat ccgatacata tacagcctac agtgcaaaat atttaatggt
3721 ataatttaga tcaagttaaa aactacatac aaagttgtga tcaacagcat cctaagataa
3781 atataaacaa aaggatatac tttgaggtgt acagattaag catataaaaa attagagact
3841 aactgggatt ttttaaagat tattccaaat taagagttgc tttgttatgc cttcagcaaa
3901 tagcttcatt ttgccaatac tgaataaaag agttatttct acaaaaaaaa aaaaaaaaaa
3961 a
//