LOCUS BC065237 3782 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens zinc finger protein 828, mRNA (cDNA clone MGC:70942
IMAGE:6162118), complete cds.
ACCESSION BC065237
VERSION BC065237.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3782)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3782)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: m Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41281611.
FEATURES Location/Qualifiers
source 1..3782
/db_xref="H-InvDB:HIT000261800"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:70942 IMAGE:6162118"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3782
/gene="ZNF828"
/db_xref="GeneID:283489"
/db_xref="HGNC:HGNC:20311"
CDS 283..2721
/gene="ZNF828"
/codon_start=1
/product="zinc finger protein 828"
/protein_id="AAH65237.1"
/db_xref="GeneID:283489"
/db_xref="HGNC:HGNC:20311"
/translation="MEAFQELRKPSARLECDHCSFRGTDYENVQIHMGTIHPEFCDEM
DAGGLGKMIFYQKSAKLFHCHKCFFTSKMYSNVYYHITSKHASPDKWNDKPKNQLNKE
TDPVKSPPLPEHQKIPCNSAEPKSIPALSMETQKLGSVLSPESPKPTPLTPLEPQKPG
SVVSPELQTPLPSPEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESV
KATLSNPKPQKQSHFPETLGPPSASSPESPVLAASPEPWGPSPAASPESRKSARTTSP
EPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPW
KPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESWKS
GPPELRKTAPTLSPEHWKAVPPVSPELRKPGPPLSPEIRSPAGSPELRKPSGSPDLWK
LSPDQRKTSPASLDFPESQKSSRGGSPDLWKSSFFIEPQKPVFPETRKPGPSGPSESP
KAASDIWKPVLSIDTEPRKPALFPEPAKTAPPASPEARKRALFPEPRKHALFPELPKS
ALFSESQKAVELGDELQIDAIDDQKCDILVQEELLASPKKLLEDTLFPSSKKLKKDNQ
ESSDAELSSSEYIKTDLDAMDIKGQESSSDQEQVDVESIDFSKENKMDMTSPEQSRNV
LQFTEEKEAFISEEEIAKYMKRGKGKYYCKICCCRAMKKGAVLHHLVNKHNVHSPYKC
TICGKAFLLESLLKNHVAAHGQSLLKCPRCNFESNFPRGFKKHLTHCQSRHNEEANKK
LMEALEPPLEEQQI"
BASE COUNT 1082 a 902 c 728 g 1070 t
ORIGIN
1 tcgggaggcc gctgcgctgc agggcctcgc ggagccgccc gcgaccgcga gccgggccct
61 ccgcgcggtc catcgcccac tggacgccgc ccgcggccgg accggttcaa cttctcatct
121 ttgttcttct tcatatacta taggctgttt gctgtggttt agtcaaaaag ccatgtagaa
181 tgcctgcctt ttgaagacca cttttaaggt gtctagtaag acagcagcag tattgaaagt
241 ttttaaagaa tataaccgtg tgtgttggta acagacagaa gaatggaagc attccaggaa
301 cttcgtaaac catcagcacg tttggagtgt gaccattgca gtttcagagg cacagactat
361 gaaaatgtac aaatccatat gggtaccatc catccagaat tttgtgatga aatggatgct
421 ggtgggctag gcaaaatgat attttaccag aaaagtgcaa agttatttca ctgccataaa
481 tgcttcttca ccagcaagat gtactctaat gtatactatc acatcacatc caaacatgca
541 tccccagaca aatggaatga taaaccaaaa aatcagttga acaaagaaac agatcctgtg
601 aaaagccctc ctcttcctga acaccagaaa ataccctgca attcagcaga accaaaatcc
661 atacctgccc tttcaatgga aacacagaaa cttggttcag ttttgtctcc agaatcgcca
721 aaacctactc ctcttactcc cctggagcct cagaaacctg gctctgttgt ttctcctgag
781 ctacagacac ctcttccttc tcctgagcct tcaaaacctg cctctgtttc ttctcctgaa
841 cctccaaaat cagtccctgt ttgtgagtct cagaaacttg cccctgttcc ttctccagaa
901 ccacagaaac ctgcccctgt atctcctgag tcagtaaagg ctactcttag taatcccaaa
961 ccccagaagc agtctcattt cccagaaaca ttggggccac cttcagcctc atctccagag
1021 tcaccagttc tagctgcttc cccagaacct tggggaccat ccccagctgc atctccagaa
1081 tctcggaagt cagcccggac tacctcccct gagccaagga agccatcccc ttcagagtct
1141 cctgaacctt ggaagccatt ccctgctgtc tccccagagc ctaggagacc agcccccgct
1201 gtgtcaccag gctcttggaa accagggcca cctgggtccc ctaggccttg gaaatccaat
1261 ccttcagcat catcaggacc ttggaagcca gctaaacctg ctccatctgt gtctcctgga
1321 ccttggaaac caattccttc tgtatctcct ggaccttgga aaccaactcc atctgtgtct
1381 tctgcatcct ggaaatcttc atcagtctca cccagctcct ggaagtctcc ccctgcatct
1441 cctgagtcat ggaagtctgg cccaccagaa ctccgaaaga cagctcccac gttgtctcct
1501 gaacattgga aggcagttcc cccagtgtct ccagagcttc gcaaacccgg cccaccacta
1561 tccccagaga tccgtagtcc agcaggatct ccagagctca gaaaaccctc agggtcacca
1621 gatctttgga agctttctcc tgatcagcgg aaaacttctc ctgcttcact tgatttccct
1681 gagtcccaga aaagttcccg tggtggttct cctgatctct ggaagtcttc cttttttatt
1741 gagcctcaga aacctgtctt ccctgagacc cgaaaaccag gtccttctgg gccatctgag
1801 tcccccaaag cagcctcaga tatctggaag cctgttctct ctatcgatac tgagcctaga
1861 aaacctgccc tgtttcccga gcctgccaaa acagcccctc ctgcttctcc agaagcacgc
1921 aaacgtgccc tttttccaga gccccggaag catgcccttt tccctgaact ccccaaatct
1981 gctctattct cagaatcaca gaaggctgtt gagcttggtg atgaactaca aatagatgcc
2041 atagatgatc aaaaatgtga tattttggtt caggaagaac ttctagcttc acctaagaaa
2101 ctcttagaag atactttatt tccttcctca aagaagctca agaaagacaa ccaagagagc
2161 tcagacgctg agcttagtag tagtgagtac ataaaaacag atttggatgc gatggatatt
2221 aagggccagg aatcaagcag tgatcaagag caggttgatg tggaatccat tgattttagc
2281 aaagagaaca aaatggacat gactagtcca gagcagtcta gaaatgtgct acagtttact
2341 gaagaaaaag aagcttttat ctccgaagag gagattgcaa aatacatgaa gcgtggaaaa
2401 ggaaagtatt attgcaaaat ttgttgctgt cgtgctatga aaaaaggtgc tgttttgcat
2461 catttggtta ataagcataa tgttcatagc ccttacaaat gcacaatctg tggaaaggct
2521 tttcttttgg aatctctcct taaaaatcat gtagcagccc atgggcaaag tttacttaaa
2581 tgtccacgtt gtaattttga atcaaatttc ccaagaggtt ttaagaaaca tttaactcat
2641 tgtcaaagcc ggcataatga agaggcaaat aaaaagctaa tggaagctct tgaaccgcca
2701 ctggaggagc agcaaatttg ataacacagt gtgaatattt gttctacaaa ggtgtttgtt
2761 ggaaccattc tttgtaagta tagcttatca gatagcatag ttggatcagt agatgacatg
2821 tatggtgtac cgtgtttcac tgtctcagtt gtgttactaa gaatgagcat ttgatcattt
2881 ttttctggtc tctgtctatg tgactatctt gtaagtcaat aaatttctgt atagtccaga
2941 tggattaaac ttctcatttc ttttaaatat gtatgaataa taatacaagg aagtaggcat
3001 tccatttaat aatcaagagc aagttgtact caaagcattc agttaaagtg tatctgtgtg
3061 tggaactaat ttcagacaat agaaaatatt agttgaaatg tttaagaatt aggcatgaaa
3121 aataaatttg agaaattttg tttccttaca tgtattttta aatcataaga gttattttct
3181 atctgatgta aaattagttt ataaatctta atcagcttct agatgtttat tagcttttat
3241 gtcatgaaat gttggagtct cagggttgct gattttctgc taatgggaaa aattgactaa
3301 gtctttaaaa tagtttgcag ccttctccca caggagacaa gtgaaagata agtgtgattt
3361 tagatctttc ttgtccatag ttgttttcag tggagtcttc cattctgtat cttaccctaa
3421 gatctggttc ttccctcccc atccccaccc cccacccacc gcctgccagc tcacactaat
3481 agatgattct taattgccaa atgtgttaga gtttgtatat cctactcctg ggccttacat
3541 gtcgcctgtt ggggcttaag accaggttga taagtaggaa ctgaaagtct tccagattca
3601 cagtagaaaa ttttatagac atttctgtta aagaaatata tcgattttat gtttttcaat
3661 tatgttactg taaatacctt gtacctgttc atggattatt ttattctaaa atattttgtc
3721 aaatgtgtat caaccaaatt aaaaagaaag gttttcatgt caaaaaaaaa aaaaaaaaaa
3781 aa
//