LOCUS BC065180 3910 bp mRNA linear HUM 16-FEB-2007
DEFINITION Homo sapiens keratin 80, mRNA (cDNA clone MGC:71341 IMAGE:6573884),
complete cds.
ACCESSION BC065180
VERSION BC065180.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3910)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3910)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: o Column: 3.
FEATURES Location/Qualifiers
source 1..3910
/db_xref="H-InvDB:HIT000261744"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71341 IMAGE:6573884"
/tissue_type="Prostate, carcinoma"
/clone_lib="NIH_MGC_40"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3910
/gene="KRT80"
/gene_synonym="KB20"
/db_xref="GeneID:144501"
/db_xref="HGNC:HGNC:27056"
CDS 99..1367
/gene="KRT80"
/gene_synonym="KB20"
/codon_start=1
/product="keratin 80"
/protein_id="AAH65180.1"
/db_xref="GeneID:144501"
/db_xref="HGNC:HGNC:27056"
/translation="MACRSCVVGFSSLSSCEVTPVGSPRPGTSGWDSCRAPGPGFSSR
SLTGCWSAGTISKVTVNPGLLVPLDVKLDPAVQQLKNQEKEEMKALNDKFASLIGKVQ
ALEQRNQLLETRWSFLQGQDSAIFDLGHLYEEYQGRLQEELRKVSQERGQLEANLLQV
LEKVEEFRIRYEDEISKRTDMEFTFVQLKKDLDAECLHRTELETKLKSLESFVELMKT
IYEQELKDLAAQVKDVSVTVGMDSRCHIDLSGIVEEVKAQYDAVAARSLEEAEAYSRS
QLEEQAARSAEYGSSLQSSRSEIADLNVRIQKLRSQILSVKSHCLKLEENIKTAEEQG
ELAFQDAKTKLAQLEAALQQAKQDMARQLRKYQELMNVKLALDIEIATYRKLVEGEEG
RMDSPSATVVSAVQSRCKTAPSLPYPLCSL"
BASE COUNT 851 a 1164 c 1046 g 849 t
ORIGIN
1 cccagctgtg accagagcaa ccagagcctg ccacccgacg caaccccagg ctcactcgct
61 cacccccctg ggccctcctg cttccggccg ggggcaccat ggcctgccgc tcctgcgtgg
121 ttggcttcag cagcctcagc agctgtgagg tgaccccggt gggcagcccc cggcctggaa
181 cctcaggatg ggacagctgc agggcccccg ggccgggctt cagctcccgc agcctcacag
241 gctgctggtc ggctggcact atctccaagg tgactgtgaa ccccggcctg ctggtgcccc
301 tggatgtcaa gttggacccc gctgttcagc agctgaagaa ccaggagaag gaggagatga
361 aggccctcaa tgataaattt gcctccctaa ttggcaaggt gcaagccctg gaacagcgca
421 accagctgct ggagacacgc tggagcttcc tgcagggcca ggactcagcc atcttcgacc
481 tcgggcatct ctatgaggaa tatcagggcc ggctgcagga ggaactgcgc aaagtgagcc
541 aggagcgggg gcagctggag gccaacctgc tgcaggtgct ggagaaggtt gaggagtttc
601 gaatcaggta tgaggatgag atctccaagc gcacagacat ggagttcacc tttgttcagc
661 tgaagaagga cctggatgca gagtgtcttc atcggactga actggaaacc aagttaaaaa
721 gcctggagag cttcgtggag ttgatgaaaa ccatctatga gcaggagctg aaggacctgg
781 cagcacaggt gaaggatgtg tcggtgaccg tcggcatgga cagccgctgc cacatcgacc
841 tgagcggcat cgtggaggag gtgaaggccc agtatgacgc cgtcgcggct cgcagcctgg
901 aggaggccga ggcatactct cggagccagc tggaggagca ggccgcccgc tcggccgagt
961 atgggagcag cctccagagc agccgcagcg agatcgcgga tctcaatgtg cgcatccaga
1021 agctgcggtc ccagatcctc tctgtcaaga gccattgcct gaaactggag gagaacatca
1081 agacagctga ggagcagggt gagctggcct tccaggatgc caagaccaag ctggcccagc
1141 tggaggccgc cctgcagcag gccaagcagg acatggcgcg gcagctgcgc aagtaccagg
1201 agctgatgaa tgtcaagctg gccctggaca tcgagatcgc cacctacagg aagctggtgg
1261 agggcgagga gggcaggatg gactcgccct cagccactgt ggtcagcgct gtgcagtcca
1321 ggtgcaaaac cgccccttcc ctcccctacc cattatgttc cctgtagctg cctccagatc
1381 aggcctctcc aaggccccct cccgaaagaa gaagggcagc aaaggccccg tgatcaaaat
1441 caccgaaatg tcagagaagt acttctcgca ggagtcggag gtctcagagt aaggcggctg
1501 gaccccagga accccagggc actccactgc agcaggaggg acttaagcta gactcaagaa
1561 agcagcttgg agcctctagg ttgagaagag aggcaaaacc tgatattgaa ctgagagagg
1621 ggttcaaaac tgactgtgtt ttgtgggctg ccagggtggg agaggagcat caccagctcc
1681 tcagagccac tccgctccat atcagtatct cacagtccca tccttccaac cttctggcca
1741 gaggttttcc tgatgggtga gtcggaatta ggggtcagtt ttgtctccac ctcctcgctc
1801 ctctgaggct cctcctccag catcaggctc tgccaaggcc cctctgactc ttgcccaatc
1861 cttgaccttg actcctatct caagccttgc cttgtctctg cctcggaact gggactggga
1921 ctggctcatc cacctatgtg cgggagccga ggaggacggc gtgggccctg tcctgtatct
1981 ggaattcctg ggaaggctgg ctgctgaaga ccctcttggc tttcccgtgc tctttgggct
2041 ccccagagac ctgacagtat tagggagtga agggaggagg ggccctggct atttgggacc
2101 taagcctagg ccccagagat cagcccgaac acccgcatcc cttcctcctc ccatgggtcc
2161 ctcccagtag gcagtagtca gaactggatg ggctgccccc agccagctcc cagcagcttc
2221 tccggaagct gctcttgcca taatcaactc cctgggagtg gaagccagat ggcagcttga
2281 gattgggcag gagcattcga tcttcctttc acctccctgc catgctgggg tcctacccag
2341 cctggatctg agctctgtgc ccccagccgg gttgttccca gcctgagcac caggctttgg
2401 tgcaccaggc cttggagacc cctggtccca cccctgccgt gaagccccag gcccacttcc
2461 caagaatctc acttctcagg gcctctgttc tcctctccac tgggccaaat agcctggccc
2521 tcccctcctt ggcattcatg ggggagccca ggaacccccc acacctatgg ggttagagct
2581 cctcctttct tctcactcct tccccttcct ccctccatgc ccactccccc tgcctccagc
2641 aggccaggaa gaaggcacag tccaggcaag tctgggagct tccaagccct tgaggtccag
2701 ctgtggggcc caaatgacag ccttacaagg gttctaccag agaggaaaat tccacatccc
2761 accagaagac aggggtgttg gcaggcatac tcctatctcc tcctcttggc tctcaatgct
2821 gaggcttgca gaggcatccc agcggcacca gcctcccact gcacagcttc cttccctcct
2881 tcactctcct ctcccctccc tgccccttgc ctcacctcct cttctagact gcattagatt
2941 cattcatctc atttgccagg acatgttggc cagaggtctg ggcccatccc aggcctcaag
3001 gccctccagg cctgtgggga gcactggagg gttactgact ctctggccat gggaactcag
3061 agattctcat ccccaaagtc ccaaaagagg gtgctgattg gtgcttttcc tcaggctctt
3121 cattggtttc caagggagca aatcctcagt ggggatacaa gacatataaa gtatatatta
3181 ttttttcata acttatgtgg cttttaactt attgcttccc ttcctgtttc tgcatgatca
3241 gtctgtatgt actatctgga aagataacac atactccagc cacctcacct gattggctat
3301 cttggggcca tgtccccttc ttgctgccac aggatgaata aagtgttgag atttgtctat
3361 ggagaaagct gtgtgtctgt ttttatctcc cctctcagga ccagtcagcc actggtcaat
3421 caggctgatc atggaacatt aggaattctc caattaaggg agaaaaagtc cagggactta
3481 gttatatctt cagaccagtg cagctgggac acacaaagtt ctcctgtctc accatctgat
3541 atggtttgga tgctcgtccc ctccaaatct catgttgaaa tgtaattccc agtgttggaa
3601 gtggagcctg gtgggaagta tttggatcat gagagaggat ccttcatgaa tggctcagca
3661 ccatctcctt ggtgatgagt gagttctcac tcaattcaca tagatatggt tgtttaaaag
3721 agtctgagac ctctcccctc tttctcgcca tgtgatatgc ctgctccccc ttcaccttcc
3781 gcctttactg taagcttcct gaggccctca ccagaagctg agcaaatgtt ggtgccatgc
3841 cagtacagcc tgcagaattg tgagccaaaa taaatgtctt ttctttataa attaaaaaaa
3901 aaaaaaaaaa
//