LOCUS BC064981 3599 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens coiled-coil and C2 domain containing 1A, mRNA (cDNA
clone MGC:71119 IMAGE:6585236), complete cds.
ACCESSION BC064981
VERSION BC064981.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3599)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3599)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: o Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24431972.
FEATURES Location/Qualifiers
source 1..3599
/db_xref="H-InvDB:HIT000261688"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71119 IMAGE:6585236"
/tissue_type="Ovary, teratocarcinoma"
/clone_lib="NIH_MGC_109"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3599
/gene="CC2D1A"
/gene_synonym="FLJ20241"
/gene_synonym="FREUD-1"
/gene_synonym="MRT3"
/db_xref="GeneID:54862"
/db_xref="HGNC:HGNC:30237"
/db_xref="MIM:610055"
CDS 204..3059
/gene="CC2D1A"
/gene_synonym="FLJ20241"
/gene_synonym="FREUD-1"
/gene_synonym="MRT3"
/codon_start=1
/product="coiled-coil and C2 domain containing 1A"
/protein_id="AAH64981.1"
/db_xref="GeneID:54862"
/db_xref="HGNC:HGNC:30237"
/db_xref="MIM:610055"
/translation="MHKRKGPPGPPGRGAAAARQLGLLVDLSPDGLMIPEDGANDEEL
EAEFLALVGGQPPALEKLKGKGPLPMEAIEKMASLCMRDPDEDEEEGTDEDDLEADDD
LLAELNEVLGEEQKASETPPPVAQPKPEAPHPGLETTLQERLALYQTAIESARQAGDS
AKMRRYDRGLKTLENLLASIRKGNAIDEADIPPPVAIGKGPASTPTYSPAPTQPAPRI
ASAPEPRVTLEGPSATAPASSPGLAKPQMPPGPCSPGPLAQLQSRQRDYKLAALHAKQ
QGDTTAAARHFRVAKSFDAVLEALSRGEPVDLSCLPPPPDQLPPDPPSPPSQPPTPAT
APSTTEVPPPPRTLLEALEQRMERYQVAAAQAKSKGDQRKARMHERIVKQYQDAIRAH
KAGRAVDVAELPVPPGFPPIQGLEATKPTQQSLVGVLETAMKLANQDEGPEDEEDEVP
KKQNSPVAPTAQPKAPPSRTPQSGSAPTAKAPPKATSTRAQQQLAFLEGRKKQLLQAA
LRAKQKNDVEGAKMHLRQAKGLEPMLEASRNGLPVDITKVPPAPVNKDDFALVQRPGP
GLSQEAARRYGELTKLIRQQHEMCLNHSNQFTQLGNITETTKFEKLAEDCKRSMDILK
QAFVRGLPTPTARFEQRTFSVIKIFPDLSSNDMLLFIVKGINLPTPPGLSPGDLDVFV
RFDFPYPNVEEAQKDKTSVIKNTDSPEFKEQFKLCINRSHRGFRRAIQTKGIKFEVVH
KGGLFKTDRVLGTAQLKLDALEIACEVREILEVLDGRRPTGGRLEVMVRIREPLTAQQ
LETTTERWLVIDPVPAAVPTQVAGPKGKAPPVPAPARESGNRSARPLHSLSVLAFDQE
RLERKILALRQARRPVPPEVAQQYQDIMQRSQWQRAQLEQGGVGIRREYAAQLERQLQ
FYTEAARRLGNDGSRDAAKEALYRRNLVESELQRLRR"
BASE COUNT 822 a 1159 c 1121 g 497 t
ORIGIN
1 gcgctccggt gcggcggcgc ccgaggcccg aggcggaagt gggacggcca agcagggaag
61 cgagggctcg ggatcgacgg ccgcggggcg ccgacgagga gtgcaggact caggaagggc
121 gagtgcgcgg cgacagagcc cggggaagga ggcagggcaa ggccgggctt gggggcaggt
181 ggtccgggca tccagccttg aagatgcaca agaggaaagg acccccggga cccccgggca
241 gaggcgccgc ggccgcccgc cagctgggcc tgctggttga cctctcccca gatggcctga
301 tgatccctga ggacggggct aacgatgaag aactggaggc tgagttcttg gctttggtcg
361 ggggccagcc cccagccctg gagaagctca aaggcaaagg tcccttgccg atggaggcca
421 ttgagaagat ggccagcctg tgcatgagag acccggatga ggatgaggag gaggggacgg
481 atgaggacga cttggaggct gatgatgacc tgctggcgga gctaaatgag gtccttggag
541 aggagcagaa ggcttcagag accccacctc ctgtggccca gccgaagcct gaggcccctc
601 atccggggct ggagaccacc ttgcaggaga ggctggcgct ctatcagaca gcaattgaaa
661 gcgccagaca agctggagac agcgccaaga tgcggcgcta cgatcggggg cttaaaacac
721 tggaaaacct gctcgcctcc atccgtaagg gcaatgccat tgacgaagcg gacatcccgc
781 cgccagtggc cataggaaaa ggcccggcgt ccacgcctac ctacagccct gcacccaccc
841 agccggcccc tagaatcgcg tcagccccag agcccagggt caccctggag ggaccttctg
901 ccaccgcccc agcctcatct ccaggcttgg ctaagcccca gatgccccca ggtccctgca
961 gccctggccc tctggcccag ttgcagagcc gccagcgcga ctacaagctg gctgccctcc
1021 acgccaagca gcagggagat accactgctg ccgctagaca cttccgcgtg gctaagagct
1081 ttgatgctgt cttggaggcc ctgagccggg gtgagcccgt ggacctctcc tgcctgcccc
1141 ctccacccga ccagctgccc ccagacccac cgtcaccacc gtcgcagcct ccgacccccg
1201 ctacggcgcc ctccacaaca gaggtgcccc cacccccgag gaccctgctg gaggcgctgg
1261 agcagcggat ggagcggtac caggtggccg cagcccaggc caagagcaag ggggaccagc
1321 ggaaagctcg aatgcacgag cgcatcgtca agcaatacca agatgccatc cgagcccaca
1381 aggctggccg agccgtggat gtcgctgaat tgcccgtgcc cccaggcttc cccccaatcc
1441 agggcctgga ggccaccaag cccacccagc agagtctggt gggtgtcctg gagactgcca
1501 tgaagctggc caaccaggat gaaggcccag aggatgaaga ggatgaggtg cctaagaagc
1561 agaacagccc tgtggccccc acagcccagc ccaaagcccc accctcaaga actccccagt
1621 cgggatcagc cccaacagcc aaagcgcccc ccaaagccac atccaccaga gcccagcagc
1681 agctggcctt cctagagggc cgcaagaagc agctcctgca ggccgcactg cgagccaagc
1741 agaaaaacga cgtggagggt gccaagatgc acctgcgcca agccaaggga ctggagccta
1801 tgctggaggc ctcgcgcaat gggctgcctg tggacatcac caaggtgccg cctgcccctg
1861 tcaacaagga cgactttgcc ctggtccagc ggcctggccc gggtctgtct caggaggccg
1921 cccggcgcta tggtgaactc accaagctca tacggcagca gcacgagatg tgcctgaacc
1981 actcaaacca attcacccag ctgggcaaca tcactgaaac caccaagttt gaaaagttgg
2041 cggaggactg taagcggagc atggacattc tgaagcaagc cttcgtccgg ggtctcccca
2101 cgcccaccgc ccgctttgag caaaggacct tcagcgtcat caagatcttc cctgacctca
2161 gcagcaacga catgctcctc ttcatcgtga agggcatcaa cttgcccaca cccccaggac
2221 tgtcccctgg cgatctggat gtctttgttc ggtttgactt cccctatccc aacgtggaag
2281 aagctcagaa agacaagacc agtgtgatca agaacacaga ctcccctgag ttcaaggagc
2341 agttcaaact ctgcatcaac cgcagccacc gtggcttccg aagggccatc cagaccaagg
2401 gcatcaagtt cgaagtggtt cacaaggggg ggctgttcaa gactgaccgg gtgctgggga
2461 cagcccagct gaagctggat gcactggaga tagcatgtga ggtccgggag atccttgagg
2521 tcctggatgg tcgccggccc acaggggggc gactggaggt aatggtccgg attcgggagc
2581 cactgacagc ccagcagttg gagacgacga cagagaggtg gctggtcatt gaccctgtgc
2641 cggcagctgt gcccacacag gttgctgggc ccaaagggaa ggcccctcct gtgcctgccc
2701 ctgcaaggga gtcagggaac agatcagccc ggcccctgca tagcctcagt gtgctggcgt
2761 ttgaccaaga gcgtctggag cggaagatcc tggccctcag gcaggcgcgg cggccggtgc
2821 ccccagaagt ggcccagcag taccaggaca tcatgcaacg cagccagtgg cagagggcac
2881 agctggagca ggggggtgtg ggcatccgac gggaatacgc agcccagctg gagcggcagc
2941 tgcagttcta cacggaggct gcccggcgcc tgggcaacga tggcagcagg gatgctgcaa
3001 aggaggcgct ctataggcgg aatctggtag agagtgagct gcagcggctc cgcaggtgag
3061 gagcccatgg ggcgggcagc ccccagaaag cgggcagcag gccccgatac cgggaagagc
3121 cgacacagcc acgaaccaga caagcagaca atcagcggac aatcggttct ggactcaccc
3181 ctcatccggg cccccagccc cgccagagcc tccgtggctg cgggtgttgg gaaccatgcc
3241 tgccagccag tatgtgcccc tcacccaggc ctggctgggc cctggagagt cctgtttgca
3301 cagcccaggg gtgtccggcc tctggcccgc cccggagcag ggagggtggc tggggccaag
3361 ccccgagggc ccctgcaagc actttacttc ctgttcctcc ccagccttaa ccccaaagcc
3421 ctcctgcacc ccaaagaagc cactgaggct ggccgagcca cactgtctcc ccaggggcgt
3481 cgacctggcc cagctgggtc cccagggcca gcacatggaa taaaatagcc agggccacac
3541 tcaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//